Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3238 ATGAACGAAGGGGAGCAACTATGCGACGCCGCCAGGAACGGCGACGCCGAAAAGCTGAAGTCCCTGATAGACTCCGGCGCCGACGTTAGCCACTTCGACGCGGAGGGCCTCACTCCTCTTATGCACGCTGCAAAGCAAGGGCACGCACACATCCTCTCCATCCTTCTCTCTGCTGGCGCCCCATGGAACGCCCTCTCTCCTTCCAACCTCTCCGCCGGTGACTTCGCCATGGAAGCAGGCCATCAGGACGCCTACGAGCTCCTCCTCAATGCCGGGATTCAGGCTGAACTGGTCCTGGGTACAATTGCAAGAAAAGCAAATAAAAATGCGGAATCCGGTCATGATTACTTGGAAGATAGGGTCAGTTTCAGCGAAGACAAACTTATGGACACTGATAGCAAGGCTGTGATGATGGCATGGGAGAAGCCCTTGATGGAGGCTCATGCTAAAGCTGTTTGTTCGGGTGGTGGTCACATACTCAATATTGGATTCGGAATGGGTCTTGTCGATACGGCCATTCAGCAGTATGCACCTGCCACTCACACCATTGTTGAGGCTCATCCGGAGGTTTATGAACGCATGCTTGGTACAGGTTGGGGGAAGAAGGAAAATGTGAAGATTGTTTTTGGTCGCTGGCAAGATGTTCTGTCTCAGCTTGAAACATATGATGGAATTTTCTTCGATACCTATGGGGAGTACTATGAAGACCTGAGAGAGTTCCACCAACATCTTCCTGCACTGTTGAAGCCAGGTGGGATCTATTCATTCTTCAATGGCCTTTGTGGTGTTAATGCATTTTTTCATGTTGTGTATTGCCATTTGGTATCCCTTGAGCTCGAGAATTTGGGTTATTCCACACAGTTGATTCCTTTGCCCGTTAAGGATTGTTTGGGAGAAGAAGTTTGGGAAGGTGTAAAACACAGATATTGGCAGCTTGATACATACTACCTCCCTGTCTGTCAGTCTTTAGAGGATCCCGAGTGA 984 0.4959 MNEGEQLCDAARNGDAEKLKSLIDSGADVSHFDAEGLTPLMHAAKQGHAHILSILLSAGAPWNALSPSNLSAGDFAMEAGHQDAYELLLNAGIQAELVLGTIARKANKNAESGHDYLEDRVSFSEDKLMDTDSKAVMMAWEKPLMEAHAKAVCSGGGHILNIGFGMGLVDTAIQQYAPATHTIVEAHPEVYERMLGTGWGKKENVKIVFGRWQDVLSQLETYDGIFFDTYGEYYEDLREFHQHLPALLKPGGIYSFFNGLCGVNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEEVWEGVKHRYWQLDTYYLPVCQSLEDPE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3238 327 Gene3D Vaccinia Virus protein VP39 102 322 IPR029063 -
Ahy17g3238 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 320 IPR029063 -
Ahy17g3238 327 Pfam Ankyrin repeats (3 copies) 8 94 IPR002110 GO:0005515
Ahy17g3238 327 CDD AdoMet_MTases 159 254 - -
Ahy17g3238 327 ProSiteProfiles Ankyrin repeat region circular profile. 35 60 - -
Ahy17g3238 327 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 4 322 - -
Ahy17g3238 327 Gene3D - 2 98 IPR036770 -
Ahy17g3238 327 PIRSF Rmt2 1 113 IPR017408 GO:0016274
Ahy17g3238 327 PIRSF Rmt2 101 324 IPR017408 GO:0016274
Ahy17g3238 327 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 109 327 IPR026480 -
Ahy17g3238 327 SUPERFAMILY Ankyrin repeat 7 95 IPR036770 -
Ahy17g3238 327 ProSiteProfiles Ankyrin repeat profile. 35 67 IPR002110 GO:0005515
Ahy17g3238 327 SMART ANK_2a 35 64 IPR002110 GO:0005515
Ahy17g3238 327 SMART ANK_2a 68 97 IPR002110 GO:0005515
Ahy17g3238 327 SMART ANK_2a 2 31 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3238 Ahy-Chr17 134475548 134477514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3238 6 107 MAP Kinase Kinase Kinase AT2G31800 31.373 4.86e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3238 K18477 - gmx:100527621 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3238 17 134475548 134477514 Ahy17g3238 17 134475548 134477514 ECH
Ahy17g3238 17 134475548 134477514 Ahy8g0954 8 18367791 18369703 hybridization