Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3198 ATGGATCTTGGGGCGGTGGGTTTGGATGGGTTGGTGGGTGTGGGTGGTTCTATTGGGTGTTCAGATGGTGAGACAAAGCACAAGTGGTACGGATCTGGGTTGTTGAAGCAGGAGAGATCTGGCGGTGGCAACACAAACAACGAAGATGATGATGAATATTGGAGGAGCAACAAAGTGGCCAAGACTAGTATTAATGGCGAGAGGAACTCGTCATCAAGCTTGCTGAGATCCAATGCAAGTCTCTTCTCTGATGTTGGTGGCAACAACCAGCAGCAGCAACAAATGCTAAGTTTCTCTTCACCAAAGTCAGACACATTCCCATATCATTACCTTCCCTTATCAAGAAATACAGGTTGTCACAGTTGGGGAAGCAATAGCATGCATGGGAATGGGAATGGGAATGGGATTGGGATGAGAGGGGCATTCACTCCATCACAGTGGATGGAGCTAGAACAGCAGGCCCTGATCTACAAGTATATAACCGCTAATGTCCCTGTCCCATCTCATCTTCTTATTCCCATCAAGAAAGCCCTTCATTCTGCTGGCTTCTCTCACTTCTTCAGGCCCAGTGCAGTGGGCTGGGCTGGGTTCCATCTGGGCTTCTCTAACAGCACCGATCCCGAGCCAGGCAGGTGCCGGAGAACAGATGGCAAGAAATGGCGTTGCTCCCGAGATGCCGTTGTCGACCAGAAGTATTGTGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCACAATGGCCATGCCCTCACCGGGACAACCACCTCCACCACCACCAAGAATGTGGTGCCCGGAAACACTCCTCCTCCTTATTCTTCACCTCCTAATACCATCAGCAGGATGTTTATGACTACTACTACTACTACTAATAATAAGGAGAGTAATGGTAGTGAGAGAATCCCAGAAGCTGAAGATGCACTTCCAATGCTGCCACCAACTCTTGAGCTGAAACCAAAGGAGGAAAACCCCTTCATCATTCCCAAACACCAAATCCCATACCAACAGGAATCTTCAAGGAATGAGTTTGGTCTTGTCACTTCTGATTCCTTACTTAACCCTTCCCAGAAGAGCACCACAACCTTAACAGACAGGGAAACTGATTCCCATCATTCCCTCAGGCATTTCATCGACGACTGGCCCAAAACCCAGACCCACCACCGCTCTGCCTTGTCGTCGTGGCCGGAGTCGGAGAGGACCGAGCTCTCCATTTCCATCCCCATGACAACAACCTCCAATGACTTCATGTCGTCCACCTCCTCTCCCACCAATGACAAGCTCACTCTCTCACCCCTGCGTCTATCAAGGGAACTAGACCCGATTCAAATGGGTTTGGGAGTGGGAAACAATGCTTTAAGTGATTCATCAAACTCATCAAGGCAAGCTAACTGGATTCCAATCACTTGGGAGAGTTCAATGGGTGGTCCTCTTGGAGAAGTTCTGAATCTCAGCACTAACAACAACAATGGAAGTGATAATAATCAATGTGGCAAGAACAACAATTCGTCCTCAGCACTTAACCTCATGAGTGATGGGTGGGATAATACTAATAGCCCTCCATTAGGGTCTTCTCCAACTGGGGTTCTTCAGAAGACAGCCTTTGGATCTTTATCAAATAGCAGTGCTGGGAGCAGCCCAAGGGCAGAGAATAAAACACAAGAAGGTTCAAGCTTGTGCAATGATCTTCTAATGCCTGCATTGTAA 1719 0.4852 MDLGAVGLDGLVGVGGSIGCSDGETKHKWYGSGLLKQERSGGGNTNNEDDDEYWRSNKVAKTSINGERNSSSSLLRSNASLFSDVGGNNQQQQQMLSFSSPKSDTFPYHYLPLSRNTGCHSWGSNSMHGNGNGNGIGMRGAFTPSQWMELEQQALIYKYITANVPVPSHLLIPIKKALHSAGFSHFFRPSAVGWAGFHLGFSNSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGHNGHALTGTTTSTTTKNVVPGNTPPPYSSPPNTISRMFMTTTTTTNNKESNGSERIPEAEDALPMLPPTLELKPKEENPFIIPKHQIPYQQESSRNEFGLVTSDSLLNPSQKSTTTLTDRETDSHHSLRHFIDDWPKTQTHHRSALSSWPESERTELSISIPMTTTSNDFMSSTSSPTNDKLTLSPLRLSRELDPIQMGLGVGNNALSDSSNSSRQANWIPITWESSMGGPLGEVLNLSTNNNNGSDNNQCGKNNNSSSALNLMSDGWDNTNSPPLGSSPTGVLQKTAFGSLSNSSAGSSPRAENKTQEGSSLCNDLLMPAL* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3198 572 SMART QLQ_2 140 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy17g3198 572 MobiDBLite consensus disorder prediction 483 564 - -
Ahy17g3198 572 PANTHER - 21 559 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy17g3198 572 MobiDBLite consensus disorder prediction 34 54 - -
Ahy17g3198 572 ProSiteProfiles QLQ domain profile. 141 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy17g3198 572 MobiDBLite consensus disorder prediction 354 374 - -
Ahy17g3198 572 MobiDBLite consensus disorder prediction 254 272 - -
Ahy17g3198 572 MobiDBLite consensus disorder prediction 483 572 - -
Ahy17g3198 572 Pfam WRC 207 249 IPR014977 -
Ahy17g3198 572 Pfam QLQ 141 174 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy17g3198 572 ProSiteProfiles WRC domain profile. 206 250 IPR014977 -
Ahy17g3198 572 PANTHER GROWTH-REGULATING FACTOR 9 21 559 - -
Ahy17g3198 572 MobiDBLite consensus disorder prediction 240 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3198 Ahy-Chr17 134025101 134028003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3198 31 540 GRF Transcription Factor Family AT2G22840 42.463 1.92e-96 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Ahy17g3198 WRC 5.30E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3198 - - aprc:113865097 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3198 17 134025101 134028003 Ahy17g3198 17 134025101 134028003 ECH