Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3186 ATGATGATGGCCTTCTCTAATAATAATGACCAAGAACTTGGACTTGGTCTTGGTCTTAGTCTTGTTCATGGTGAAAACTGTAGGCAGAAGAAGAAGGAGGAGGAGGAGGGTCCATGCAGCAATATTAAGGCATACCCATCTCTTACTTTAGGACCAGAACAGGATTCTAGATCTTCTCAAAGCGCAGGTGTTTCTTCATTTTCCAACTCATCGTCTAGCATCAAGAGGGAGAGAGACGAAGAATTCTTGCTGGACTTAGACGAAGAAGAAAACAAGAAGAATGGTAACCCCAGAAAGAAACTTAGGCTCACCAAACAACAATCTGCACTCTTAGAGGATAGCTTCATACACCATTCTACTCTGAATCCGCAAAAGCAAGAGTTGGCAAAGAAGCTCAATCTGAGAGCGAGGCAAGTGGAGGTGTGGTTTCAGAACAGGAGAGCAAGGACAAAATTGAAGCAAACGGAAGCGGAGTGTGAGATATTGAAGAAGTGGTGTGAGAGGCTAAGAGAAGAGAACAAGAGGTTGCAAAAGGAGCTGCAACATCTAAAATCCATGAAAACAAACAACAAATAA 576 0.4271 MMMAFSNNNDQELGLGLGLSLVHGENCRQKKKEEEEGPCSNIKAYPSLTLGPEQDSRSSQSAGVSSFSNSSSSIKRERDEEFLLDLDEEENKKNGNPRKKLRLTKQQSALLEDSFIHHSTLNPQKQELAKKLNLRARQVEVWFQNRRARTKLKQTEAECEILKKWCERLREENKRLQKELQHLKSMKTNNK* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3186 191 MobiDBLite consensus disorder prediction 25 39 - -
Ahy17g3186 191 SUPERFAMILY Homeodomain-like 95 161 IPR009057 -
Ahy17g3186 191 Pfam Homeodomain 98 151 IPR001356 GO:0003677
Ahy17g3186 191 MobiDBLite consensus disorder prediction 51 72 - -
Ahy17g3186 191 MobiDBLite consensus disorder prediction 25 72 - -
Ahy17g3186 191 Pfam Homeobox associated leucine zipper 153 187 IPR003106 GO:0006355|GO:0043565
Ahy17g3186 191 CDD homeodomain 97 154 IPR001356 GO:0003677
Ahy17g3186 191 PANTHER - 60 188 - -
Ahy17g3186 191 PANTHER - 3 54 - -
Ahy17g3186 191 Gene3D - 90 160 - -
Ahy17g3186 191 SMART HOX_1 96 157 IPR001356 GO:0003677
Ahy17g3186 191 ProSitePatterns 'Homeobox' domain signature. 128 151 IPR017970 GO:0000981|GO:0006355
Ahy17g3186 191 SMART halz 153 191 IPR003106 GO:0006355|GO:0043565
Ahy17g3186 191 Coils Coil 152 189 - -
Ahy17g3186 191 ProSiteProfiles 'Homeobox' domain profile. 94 153 IPR001356 GO:0003677
Ahy17g3186 191 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 60 188 - -
Ahy17g3186 191 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 3 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3186 Ahy-Chr17 133757972 133759210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3186 3 187 Homeobox Transcription Factor Family AT2G22800 48.515 7.43e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy17g3186 Homeodomain 8.90E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3186 K09338 - gmx:100790927 169.088