Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3177 ATGGGTATCTGCATATCCGCTGAATCTTCAGAGATTCATCACGAATCATCTAACTTAGCTACTGAAGAGAATGTAACAGTGTATGAATCTAGCAAGAATGTTAATTTAAGTAAGATTCACAGACTTTCTTCTATTCACTCTAAAAAGGGTAGCAAAGGACTTAACCAAGATGCTGCCACTCTTTGCCAGGGTTATGGAATGGAGGATGCAGCATTTTGCGGTGTTTTTGATGGGCACGGAAGGAATGGTCGCATAGTGAGCCAAATAGTAAACAAGCGTTTGTCTTCACTCATTCTGGACCAAAAGAATATGATAGCTCATGCCAAGATTGATAACAATACCATATTGGAAGATGATGACTCGTGCACAAACAAGAATTTTCAAGAGTGGAAAGAAGCTATTCTTTGTGCTTTCAGGGTGATGGACAAGGAGGTGAATCAACTAGAGAATCTAGATTTCTCTTGCAGTGGAACTACAGCTATAGTTGCTATAAGACAGAGTGAAGATCTTATCATGGCTAACCTTGGTGACTCAAGAGCTGTCTTGGGGACAATTTGTGACGGTGAAATCATTCCCATTCAACTGACCACAGATATGAAGCCTGGATTACCTCGTGAAGCAGATAGAATAAGAAGTTGTAATGGTCGTGTATTTGCTCTACATGAGGAACCACACATCCAAAGAGTGTGGTTACCCAATGAGAACTCCCCAGGCCTAGCCATGTCTCGTGCTTTTGGAGATTTCATTCTTAAGGACCACGGTATCATTGCTATTCCGGAGATTTCGTTTCGCCCTCTAACATCAAGTGACCAATTTGTTGTGCTTGCAAGTGATGGGGTGTGGGATGTACTAAGCAACATCGAGGTTTGCTCGATCGTGTGGATGACAGAGAATGAAGCAGCGGCAGCTAAGGCAGTGGTGGAAGCAGCTACAGCTGCATGGAAAAGCAAATATCCTTCCTCCAAGGTAGACGACTGCACCGCAGTTTGCCTCTTCCTGCAGAAGAAACAAAGGAGCCTAGTATATGTAAAAACTGGAAATAATGTTAACTAA 1053 0.4255 MGICISAESSEIHHESSNLATEENVTVYESSKNVNLSKIHRLSSIHSKKGSKGLNQDAATLCQGYGMEDAAFCGVFDGHGRNGRIVSQIVNKRLSSLILDQKNMIAHAKIDNNTILEDDDSCTNKNFQEWKEAILCAFRVMDKEVNQLENLDFSCSGTTAIVAIRQSEDLIMANLGDSRAVLGTICDGEIIPIQLTTDMKPGLPREADRIRSCNGRVFALHEEPHIQRVWLPNENSPGLAMSRAFGDFILKDHGIIAIPEISFRPLTSSDQFVVLASDGVWDVLSNIEVCSIVWMTENEAAAAKAVVEAATAAWKSKYPSSKVDDCTAVCLFLQKKQRSLVYVKTGNNVN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3177 350 PANTHER ALPHABET, ISOFORM E-RELATED 1 338 - -
Ahy17g3177 350 Pfam Protein phosphatase 2C 64 311 IPR001932 -
Ahy17g3177 350 Gene3D - 24 337 IPR036457 -
Ahy17g3177 350 CDD PP2Cc 41 294 IPR001932 -
Ahy17g3177 350 ProSiteProfiles PPM-type phosphatase domain profile. 42 333 IPR001932 -
Ahy17g3177 350 SUPERFAMILY PP2C-like 35 334 IPR036457 -
Ahy17g3177 350 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 338 - -
Ahy17g3177 350 SMART PP2C_4 32 331 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3177 Ahy-Chr17 133577501 133579847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3177 1 338 PP2C-type Phosphatase Gene Family AT5G26010 51.613 1.75e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3177 - - gmx:100795893 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3177 17 133577501 133579847 Ahy17g3177 17 133577501 133579847 ECH
Ahy17g3177 17 133577501 133579847 Ahy8g0884 8 17128188 17130550 hybridization
Ahy16g3378 16 150693905 150697767 Ahy17g3177 17 133577501 133579847 PCT
Ahy6g2639 6 111648597 111651778 Ahy17g3177 17 133577501 133579847 PCT
Ahy17g3177 17 133577501 133579847 Ahy16g3378 16 150693905 150697767 PCT
Ahy17g3177 17 133577501 133579847 Ahy6g2639 6 111648597 111651778 PCT