Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3166 ATGGCAAGGAAATGCACGTATTGTGGGAATTCTGGTCACAATTCAAGGACTTGCAACCACAGTTTCAGTAGTACCACAGGGGGGAGTAGTGGAATAAAGCTCTTTGGGGTACAACTTGATGATAATCAATATTCTTCTTCTTCATGCATGGACTACCTGCTATCCTTATCTGCTGCTGCTTCTTTATCATCATCGTCGCTTGTAGGTGCAAATAAAAATTCACATGAAATATCTTATTCTTACTTAACCGCCGGTGCCAGCAGTAGTGGTCTTATGTCAACGATCAAAGACAATAACAAAGGATTGGCATGGAGTGAGGAGGAGCACCGTATATTCCTAGAGGGGTTGGAGAAGCTGGGGAAGGGTAACTGGAGAGGCATATCCAGATGTTTTGTGAGAACAAGAACGCCCACTCAAGTGGCCAGCCATGCACAAAAGTATTTTCTCCGGCGGAACACTTTCAGATCAAGAAAACACCGCCTCACCCTAGCAAATGAGGGCACTAGGAATAGCGATGCCGTTGTTCTATCTCACTGGCTTGCCTCTGCAACTTCAACAAATTGCACCTCAATCCAAAGCGCAGCAGCTCCTGATTTAGAATTGAAACTTGCAACTCCCTCTCCCTCCCTCTAA 633 0.4534 MARKCTYCGNSGHNSRTCNHSFSSTTGGSSGIKLFGVQLDDNQYSSSSCMDYLLSLSAAASLSSSSLVGANKNSHEISYSYLTAGASSSGLMSTIKDNNKGLAWSEEEHRIFLEGLEKLGKGNWRGISRCFVRTRTPTQVASHAQKYFLRRNTFRSRKHRLTLANEGTRNSDAVVLSHWLASATSTNCTSIQSAAAPDLELKLATPSPSL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3166 210 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
Ahy17g3166 210 Gene3D - 104 152 - -
Ahy17g3166 210 Pfam Myb-like DNA-binding domain 103 148 IPR001005 -
Ahy17g3166 210 SUPERFAMILY Homeodomain-like 99 152 IPR009057 -
Ahy17g3166 210 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 165 - -
Ahy17g3166 210 ProSiteProfiles SANT domain profile. 104 152 IPR017884 -
Ahy17g3166 210 PANTHER TRANSCRIPTION FACTOR KUA1 1 165 - -
Ahy17g3166 210 CDD SANT 103 148 IPR001005 -
Ahy17g3166 210 SMART sant 100 150 IPR001005 -
Ahy17g3166 210 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 150 IPR006447 GO:0003677
Ahy17g3166 210 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Ahy17g3166 210 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3166 Ahy-Chr17 133485337 133486519 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy17g3166 Myb_DNA-binding 6.80E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3166 - - gmx:100806176 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3166 17 133485337 133486519 Ahy17g3166 17 133485337 133486519 ECH
Ahy17g3166 17 133485337 133486519 Ahy8g0879 8 17077264 17078451 hybridization