Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3159 ATGACATCTGCATCAAGTGAGATAAGTGCCTCTACTTCGCTACCAATAAAGAAGAAGAGAAATCTCCCAGGCCATCCAGACCCTGATGCGGAAGTGATAGCCTTATCACCAAAGAGCCTGTTGGCAACAAACCGGTTCGTTTGTGATGTTTGCAACAAAGGGTTTCAAAGAGACCAGAATCTGCAGCTTCATAGAAGGGGCCACAATCTGCCATGGAAGCTAAAGCAAAGAAGTAACAAAGAGATAATAAGGAAGAAGGTGTACGTTTGTCCAGAGCCAACTTGCGTTCACCATGACCCCTCAAGGGCACTCGGCGACCTCACCGGAATCAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGTGACAGGTGCTCCAAGCGCTACGCCGTTCATTCAGATTGGAAAGCTCACTCCAAAATCTGTGGCACCCGAGAGTACAAATGTGACTGCGGAACCATTTTTTCTAGGAGGGATAGTTTCATCGCTCACAGGGCATTCTGTGATGCTCTAGCACAAGAGAGTACGAAAGCAATCACAACCTTGTTCAACCCATCATCATCAGTGAAGAAGGAATTGCAAGAAGTTAATTTAAGATCAGAAAATCGTCCATTATGGTTGTCTTACTCAACCTCGGTTGGAGGAGAAGGAAGCCATGGAAGAGTAGTTCATAACAATAATAATAATAATAATAATAATAATAATTCAACATTATTATTCTCCTCGCCGCCGCCGCCGTCGACGTCGCTGCTTTCTACAATGATCCACCATGAAAACCCTAACCCTAATATTACTATGTTGCCACCTAATAATAATGCTTTATTATTTGAAGGCATGGCTTCATCTTATTCTTCTTCTCATAATCTCATGTCTGCTACTGCATTGTTACAAAAGGCATCAGAAATAGGTGCAACGGTGTCGCTGGGTAAACCCTATCTACAAGCTCATCATCACCATCGGGGTCACGTGCCTGAAAGCACCACCACGGGGTATGGCACCTTGTCGTCAATGGCCACATCTTCATCATCTGTTTCTGGATTATTGGACATGGATTCACGTGAAGAGATAGGGACAGGGATGATGTTTGCTCGTCATCATCATCATGGCTTCTTGGCATCTTATGAGAGTTACAAAGCTGATGAGCACACAAAAGAAGCTTCTCTTCTTGTTCATAATGATATGATGGATGGTACTAGTACCTTTGAGGAGGCTCTAATGAGAGGAATCATGAATCATCCTACGAGAGAAGATGCTGATAATAATAGTAATAACTTTGATGAACTTGTTTCAAGATCCGCGGGATCCCGCGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGTGTCAACGATGAGACTAGAGATTTTTTGGGGATTGGGGTGTTTTCTCAGAGAGATATTTTCAATATATCTGGTCTTCATCATCATCATTTGGATTCTTCTTCGTATGGCAACCAAAATCAAAAGCAACCACCCTGGCAAGGGTAA 1500 0.444 MTSASSEISASTSLPIKKKRNLPGHPDPDAEVIALSPKSLLATNRFVCDVCNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEIIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDRCSKRYAVHSDWKAHSKICGTREYKCDCGTIFSRRDSFIAHRAFCDALAQESTKAITTLFNPSSSVKKELQEVNLRSENRPLWLSYSTSVGGEGSHGRVVHNNNNNNNNNNNSTLLFSSPPPPSTSLLSTMIHHENPNPNITMLPPNNNALLFEGMASSYSSSHNLMSATALLQKASEIGATVSLGKPYLQAHHHHRGHVPESTTTGYGTLSSMATSSSSVSGLLDMDSREEIGTGMMFARHHHHGFLASYESYKADEHTKEASLLVHNDMMDGTSTFEEALMRGIMNHPTREDADNNSNNFDELVSRSAGSRGGGGGGGGGGGGGVNDETRDFLGIGVFSQRDIFNISGLHHHHLDSSSYGNQNQKQPPWQG* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3159 499 MobiDBLite consensus disorder prediction 416 453 - -
Ahy17g3159 499 SMART c2h2final6 123 143 IPR013087 -
Ahy17g3159 499 SMART c2h2final6 46 68 IPR013087 -
Ahy17g3159 499 SMART c2h2final6 88 118 IPR013087 -
Ahy17g3159 499 Gene3D Classic Zinc Finger 46 90 - -
Ahy17g3159 499 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 8 477 - -
Ahy17g3159 499 MobiDBLite consensus disorder prediction 1 16 - -
Ahy17g3159 499 Gene3D Classic Zinc Finger 101 181 - -
Ahy17g3159 499 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 68 IPR013087 -
Ahy17g3159 499 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Ahy17g3159 499 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 8 477 - -
Ahy17g3159 499 SUPERFAMILY beta-beta-alpha zinc fingers 45 143 IPR036236 -
Ahy17g3159 499 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3159 Ahy-Chr17 133383208 133385747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3159 17 181 IDZ Gene Family AT3G50700 85.455 2.08e-109 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy17g3159 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3159 K25870 - qsu:112016383 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3159 17 133383208 133385747 Ahy17g3159 17 133383208 133385747 ECH