LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy17g3154	ATGGATTTGGAATGGTTGTTCCCAATAGACAGTAATTCTTCTTCATTAACAGCAATATTATTCACTGTGGTGGCGATCATGGGAGGGTTGCTGGCCTATTTGTATGGGCCATATTGGAAGGTAAGGCAGGTTCCAGGCCCACCAACATGGCCTCTGGTAGGACATCTTCATCTCATGGCTAAGTATGGTCCTGATTTGTTCACTCTCCTTGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAACCACTAATAATAATCGCAGATCCAGAGCTGTGTAGAGAGGTTGGAACAAGAAAGGCTAAAGAAATTCCAAACAGAAGCATGCCCTCCCCTGTTTCTGCTGCCCCTATTCACCAAAGGGGTCTCTTCTTCACCAAGGGTGAACAATGGTCTACTATGAGAAGCACTGTAACTTCCTTCTTCCACACGTCATTCATATCAAGTATGGTGCCAACAATGCAGTCATTCATAGAACCAGCAACCCAGATTCTTGATTCCCATGCAGAAGCACAAGAAGACATCAACTTCTCTAACTTCTCTCTCAGATTAGCAACCGATGTTGTTGGCCAAGCATCCTTTGGTGTCAACTTCGGCCTCTCCAAGCCTCATTCCACCAAGAATGATGCCGAAGATGGCGAAGATGAAGTGTCACAATTCATCAACCAACATATCTTCAACACCACACACCTCAAGATGGACTTGTCCGGTTCCTTATCCATCATAATTGGTCTGATTCTCCCAATTCTTCAGGAACCCTGCAGGCAGATTCTCAAGAGGATACCTGGCACCATGGACTGGAAAATTGAGCGTGGTAATCGTAGTCTAAGCGGCCGTATAGATAGGATTATAGAGAAGAGAATGGAAGAGAAGGGAAGAAGTTCAAAGGATTTCTTGTCAATTGTGCTGAGTGGAAGAGAAAGAAAACAGAACTACCTCACACCAGACTACATAAGCGCTCTTACATATGAACAGCTTCTTGCAGGGTCAACTACCACATCCTTTACCATGTCTTCCATTGTATACTTGGTTGCTGGGCATCCTCACGTTGAGAAAAAGCTTCTTCAAGAGATTGATGCTTTCGGTCCAAAGGACAAGATTCCCACTCCTCAGGATCTTAAGGAAAAGTTTCCTTATCTTGACCAGGTGATTAATGAGTCAATGAGGTATTACATGGCATCCCCATTAATTGCAAGGGAAGCATCAACTGATGTAGAGATTGGAGGTTACCTTCTTCCCAAGGGGACCTGGGTGTGGTTAGCCCTCGGAGCTCTATCAAAAGACCCAAAAAGCTTTCCGGAGCCAGAGAAGTTCAAACCAGAGAGGTTTGACCCAAATTGTGAAGAAATGAAAAGAAGGCATCCCTATGCTTTTATTCCATTTGGAATTGGTCCCCGGATTTGCATTGGCAAGCAATATGCTCAACAAGAGGTCAAGCTTACATTGATTCATTTATACCGCAGATACGTGTTTCGCCACTCACCTGACATGGAAATCCCCTTAGAACTCGACTATGGTCTTGTTCTCAATTTCAAGAATGGTGTCAAGGTCCGAGTTGTAAAACGAAACATTGATTAG	1587	0.4411	MDLEWLFPIDSNSSSLTAILFTVVAIMGGLLAYLYGPYWKVRQVPGPPTWPLVGHLHLMAKYGPDLFTLLAKQYGPIYRFHMGRQPLIIIADPELCREVGTRKAKEIPNRSMPSPVSAAPIHQRGLFFTKGEQWSTMRSTVTSFFHTSFISSMVPTMQSFIEPATQILDSHAEAQEDINFSNFSLRLATDVVGQASFGVNFGLSKPHSTKNDAEDGEDEVSQFINQHIFNTTHLKMDLSGSLSIIIGLILPILQEPCRQILKRIPGTMDWKIERGNRSLSGRIDRIIEKRMEEKGRSSKDFLSIVLSGRERKQNYLTPDYISALTYEQLLAGSTTTSFTMSSIVYLVAGHPHVEKKLLQEIDAFGPKDKIPTPQDLKEKFPYLDQVINESMRYYMASPLIAREASTDVEIGGYLLPKGTWVWLALGALSKDPKSFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRICIGKQYAQQEVKLTLIHLYRRYVFRHSPDMEIPLELDYGLVLNFKNGVKVRVVKRNID*	529

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy17g3154	528	SUPERFAMILY	Cytochrome P450	38	525	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy17g3154	528	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	464	473	IPR017972	GO:0005506\|GO:0016705
Ahy17g3154	528	PRINTS	E-class P450 group I signature	71	90	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy17g3154	528	PRINTS	E-class P450 group I signature	384	402	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy17g3154	528	PRINTS	E-class P450 group I signature	471	494	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy17g3154	528	PRINTS	E-class P450 group I signature	340	366	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy17g3154	528	PRINTS	E-class P450 group I signature	320	337	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy17g3154	528	PRINTS	E-class P450 group I signature	461	471	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy17g3154	528	PRINTS	E-class P450 group I signature	424	448	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy17g3154	528	PRINTS	P450 superfamily signature	462	471	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy17g3154	Ahy-Chr17	133290144	133293616	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy17g3154	82	525	Cytochrome P450	AT2G26170	64.653	0.0	586

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy17g3154	K20771		-	gmx:100797803	739.569

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Ahy17g3154	17	133290144	133293616	Ahy17g3154	17	133290144	133293616	ECH
Ahy17g3154	17	133290144	133293616	Ahy8g0864	8	16856818	16859874	hybridization
Ahy16g3302	16	149916083	149923190	Ahy17g3154	17	133290144	133293616	PCT
Ahy6g2600	6	111214073	111221702	Ahy17g3154	17	133290144	133293616	PCT
Ahy17g3154	17	133290144	133293616	Ahy16g3302	16	149916083	149923190	PCT
Ahy17g3154	17	133290144	133293616	Ahy6g2600	6	111214073	111221702	PCT

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