Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3140 ATGGAGGAGATGTCGACTACGGTTGCAGTGCCATTAACAGTAGGTAATTCGGTGTGTGATAAGCCAACCATAGCTACCCACATGGATGTATCTAGACTTAAGCTGATGACTGATACGGGGTTGTTAAGTAATTCTGTAACAGCGGTTTCTACTGAAACGTTTATAGGCTCTAATGAGGATCATAATGGTGGCAATCTTGAGGATGAAGTTGGTAGTACAACAGTCACACCATCAAAAAAGGGAAGTGAAGGAGAAATTCCTCTGGATGATATGATATCCCAGAATAAAAGCACTTTGGTTGGTGGTGATGAAGCTTCAACCCCAGAAATCGAGGAGGATGATACCTTATCATTGGAAGGTGATCCAATTATTGATAGCTCCTGTTCTCTTTCAGCAGCCAGTGAGAACAGTAGTATTTGTGGAGATGAGTTCATCAATTCGGAGGCCAATCCGGATTTAGGAACAAGAAGTTCCGTAGACATAGGGAAGAGCATGTGCACTGTTGATGCTGTTGCCAGGGCTGCTGATTTAGGGGAGTCCAATTATGAGGCAGATATTATGAGTGAACCCCTTAATGTAGCGGTGAGCCTTGAAGAGGCAGTAGTTGGATCTGTCACAAAGCCTACTACAGTTGTTCTTCATCAGCTACCTCTAGAAAAAGTGGTGGCTGGAACAGGTGGTCGAAGTGTTTTTGAATTGGACTGTACTCCGCTTTGGGGATTTATATCTTTGTGTGGAAAAAGACCCGAGATGGAAGACGCATTTGCAACAGTACCCCGATTCATGAAGATTCCTATTGAAATGCTAATTGGTGATAGGGTAATTGATGGACTGAATAAAAGTTTGAGTCAGCAAACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAACTATTGTCGTGAGCGTATGCATTTGGCGTTGGCAGAGGAAATAGAATTAGTCAAGGAAGGTCTAATAGTTGGAAGTAGCAAGGATGATTGTCAAGACCAATGGAAAAAAGCTTTCACCAATTGCTTTTTGAAGGTTGATGCTGAAGTTGGGGGAAAAGTTAACAATGAACCTGTTGCACCGGAGACTGTCGGATCAACTGCAGTTGTTGCTGCTATCTGTTCATCTCATATCATTGTTTCAAACTGTGGTGATTCAAGAGCAGTCTTGTGCCGTGGCAAAGAGCCCATGGCTTTATCCGTTGACCATAAACCCAATCGAGATGATGAATATGCAAGAATTGAGGCAGCAGGAGGGAAGGTGATCCAGTGGAATGGTCATCGTGTATTTGGTGTCCTTGCAATGTCACGATCTATCGGTGATAGATATTTGAAGCCATGGATCATTCCGGAGCCGGAAGTTACGTTTCTTCCCCGGACGAAAGACGACGAATGCCTCATTCTGGCGAGTGATGGCCTGTGGGATGTCATGACGAATGAAGAGGTGTGCGACCTAGCTAGGAAGCGAATACTTCTCTGGCACAAGAAAAATGGCCTGACACTGCCACCAGAAAGGGGAGAGGGAGTTGATCCTGCAGCACAAGCGGCCGCAGAGTACCTATCGAGCCGCGCCTTACAGAAGGGAAGCAAAGATAACATCACAGTAATTGTGGTGGACTTAAAAGCTCAAAGAAAATTCAAGAGCAAGACATGA 1659 0.4467 MEEMSTTVAVPLTVGNSVCDKPTIATHMDVSRLKLMTDTGLLSNSVTAVSTETFIGSNEDHNGGNLEDEVGSTTVTPSKKGSEGEIPLDDMISQNKSTLVGGDEASTPEIEEDDTLSLEGDPIIDSSCSLSAASENSSICGDEFINSEANPDLGTRSSVDIGKSMCTVDAVARAADLGESNYEADIMSEPLNVAVSLEEAVVGSVTKPTTVVLHQLPLEKVVAGTGGRSVFELDCTPLWGFISLCGKRPEMEDAFATVPRFMKIPIEMLIGDRVIDGLNKSLSQQTIHFFGVYDGHGGSQVANYCRERMHLALAEEIELVKEGLIVGSSKDDCQDQWKKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAAICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRTKDDECLILASDGLWDVMTNEEVCDLARKRILLWHKKNGLTLPPERGEGVDPAAQAAAEYLSSRALQKGSKDNITVIVVDLKAQRKFKSKT* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3140 552 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 127 552 - -
Ahy17g3140 552 SUPERFAMILY PP2C-like 235 543 IPR036457 -
Ahy17g3140 552 Gene3D - 225 552 IPR036457 -
Ahy17g3140 552 ProSitePatterns PPM-type phosphatase domain signature. 289 297 IPR000222 GO:0043169
Ahy17g3140 552 ProSiteProfiles PPM-type phosphatase domain profile. 238 542 IPR001932 -
Ahy17g3140 552 SMART PP2C_4 228 540 IPR001932 -
Ahy17g3140 552 CDD PP2Cc 243 542 IPR001932 -
Ahy17g3140 552 MobiDBLite consensus disorder prediction 55 88 - -
Ahy17g3140 552 Pfam Protein phosphatase 2C 271 535 IPR001932 -
Ahy17g3140 552 PANTHER ALPHABET, ISOFORM E-RELATED 127 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3140 Ahy-Chr17 133123792 133128249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3140 1 552 PP2C-type Phosphatase Gene Family AT1G17550 48.246 5.75e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3140 K14497 - gmx:100803321 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3140 17 133123792 133128249 Ahy17g3140 17 133123792 133128249 ECH
Ahy17g3140 17 133123792 133128249 Ahy8g0851 8 16715478 16719989 hybridization