Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3136 ATGCATTATGAGATTAATGTTAGCAATCGATTAATTAAGATGAGTAGTGATAAGAATAAAAAAGCAGCAGATTCACCTGAAAACGGTGATTCCACCAACCAGTGGTTCTTTGAGCTCTCTGACTACTTGAAGCTGAATGATGATGATGATGATCAATGGCCAGATGATGATAATGTTCCACCACCACTACCAGAAGCAGAGCCATTATTTTTTCCCAATACTAATGAAGTTGGAGATTTTGGAGCAAGTGGCAGCGGCAGTAACCACCTTCAAGGGTCTTCTAATGCTCGAGAGGTTAGTGGAAGTGAGAAGAAAGATGTTAGGGAGAGAGTTGCATTCAAAACCAAGTCCGAGGTTGAAATCATAGACGATGGTTACAGGTGGAGGAAGTACGGAAAGAAAATGGTTAAGAACAGCCCAAACCCAAGAAACTACTATAGGTGTACAGTGGATGGATGTCGGGTAAAGAAGAGAGTTGAAAGAGACAGGGAAGATCCCACATATGTAATTACAACCTACGAAGGAAACCATACTCACCCAACATCTTAG 549 0.4135 MHYEINVSNRLIKMSSDKNKKAADSPENGDSTNQWFFELSDYLKLNDDDDDQWPDDDNVPPPLPEAEPLFFPNTNEVGDFGASGSGSNHLQGSSNAREVSGSEKKDVRERVAFKTKSEVEIIDDGYRWRKYGKKMVKNSPNPRNYYRCTVDGCRVKKRVERDREDPTYVITTYEGNHTHPTS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3136 182 Pfam WRKY DNA -binding domain 123 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g3136 182 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 23 181 - -
Ahy17g3136 182 MobiDBLite consensus disorder prediction 46 107 - -
Ahy17g3136 182 SUPERFAMILY WRKY DNA-binding domain 115 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g3136 182 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 181 IPR044810 GO:0003700
Ahy17g3136 182 SMART WRKY_cls 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g3136 182 MobiDBLite consensus disorder prediction 78 98 - -
Ahy17g3136 182 MobiDBLite consensus disorder prediction 1 34 - -
Ahy17g3136 182 Gene3D WRKY domain 109 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g3136 182 ProSiteProfiles WRKY domain profile. 117 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3136 Ahy-Chr17 133079909 133081676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3136 48 181 WRKY Transcription Factor Family AT5G26170 47.945 5.50e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy17g3136 WRKY 2.80E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3136 - - adu:107461015 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3136 17 133079909 133081676 Ahy17g3136 17 133079909 133081676 ECH
Ahy17g3136 17 133079909 133081676 Ahy8g0848 8 16682464 16684396 hybridization