Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3132 ATGAGTTTGAGTGCCGCAGAGGACGATTCTTCCTCGTCGGAGATTCATCTTCCGGCGGAGATAGACTGGCACATGCTGGACAAGTCCAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTGTCCGCCGCACTTTACCCCATGGTTGTCCTGAAAACTCGGCAGCAAGTTTCTTCTGCAAAATACTCGTGCCTGAACATGTCCTGCGCCATTATGCGCTACGAAGGTTTCAGAGGCTTCTACAAAGGTTTCGGAACTTCTCTGATGGGAACTATCCCAGCTCGCGCACTCTACATGGCGGCACTCGAAGCCACAAAGAGCAATGTCGGAACCGGCCTCATGGAATTGGGTTTCTCCGACACCACAGCCACCGCCATGTCTAACGCCGCCGCAGGTGTTACCTCTGCTATGGCGGCGCAACTTGTGTGGACCCCAATCGATGTTGTGAGCCAGAGACTCATGGTTCAAGGATGCAGCAGCAGCAATGGCGGTAGCAACAACAGCATGCTGAGAAACCTCAACTCAGAGAATTACAGGAACGGCATTGATGCTTTCAGGAAGATTCTGTGTGCTGATGGAGCCAGAGGGTTCTACAGAGGATTCGGTATTTCGATATTAACATACGCGCCTTCCAATGCAGTTTGGTGGACTTCATATTCAATGGTGCATAGAGTTATATGGAGTGCATTTGGTTCTTACATGTGTGACAATAACTGCAATCATTTTAGGCCTGATTCAAGGGCCATGCTTGGAGTGCAAGGTTTGAGTGCGGTTCTAGCAAGTGGGGTGTCGGCGATTGTCACAATGCCGCTTGACACCATCAAGACCAGGTTGCAGGTTTTGGATGCCGACGACAATGGAAGAAGGAGGCCGTTGACTTTTGGTCAAACCATAAGGAACTTGGTTAAGGAAGGTGGTCTTTTAGCTTGTTACAGAGGCTTGGCTCCAAGGTGGGCTTCCATGTCCATGTCTGCTACAACCATGATCACTACCTACGAGTTCTTGAAACGCTTGTCTACTAAGTCTCAAGAAAAATTTACTTGA 1047 0.4986 MSLSAAEDDSSSSEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSAKYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMAALEATKSNVGTGLMELGFSDTTATAMSNAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCSSSNGGSNNSMLRNLNSENYRNGIDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRVIWSAFGSYMCDNNCNHFRPDSRAMLGVQGLSAVLASGVSAIVTMPLDTIKTRLQVLDADDNGRRRPLTFGQTIRNLVKEGGLLACYRGLAPRWASMSMSATTMITTYEFLKRLSTKSQEKFT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3132 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 346 - -
Ahy17g3132 348 SUPERFAMILY Mitochondrial carrier 24 336 IPR023395 -
Ahy17g3132 348 Pfam Mitochondrial carrier protein 40 109 IPR018108 -
Ahy17g3132 348 Pfam Mitochondrial carrier protein 255 343 IPR018108 -
Ahy17g3132 348 Pfam Mitochondrial carrier protein 125 228 IPR018108 -
Ahy17g3132 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 109 IPR018108 -
Ahy17g3132 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 346 - -
Ahy17g3132 348 Gene3D Mitochondrial carrier domain 30 347 IPR023395 -
Ahy17g3132 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 226 IPR018108 -
Ahy17g3132 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3132 Ahy-Chr17 133048418 133050255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3132 14 345 Chloroplast and Mitochondria Gene Families AT5G26200 66.265 3.97e-158 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3132 K15121 - gmx:100784202 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3132 17 133048418 133050255 Ahy17g3132 17 133048418 133050255 ECH
Ahy17g3132 17 133048418 133050255 Ahy8g0843 8 16623002 16624641 hybridization
Ahy17g3132 17 133048418 133050255 Ahy10g1805 10 101182759 101191939 hybridization