Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3130 ATGGATGCGAATGGAGGTGAGGCGATAGGGGAGTGCGGGGGTGGTGTAAGTGACGTGAACGAGGAGATGAATGCGGAAGAGGTTGGTGGTGATGAGGTTCAGGAGGAACATTTGCCTGAAGGAGAACCAGGGTTTGACTTGGGCGCGGATGATATTTTGAACCAAGTTTGGAACAGTGTGGAAGATGCATATGAGTTTTATCGAAGGTATGGAAGAGTCAACGGATTTGGGGTACGGAAAGGGGACTCAGATAAAGATAGCCACGGTAATGTTGTGAGATATCGATTTTTTTGTAACAAGGAAGGATTGAGGGAAATCAAGCACTATAACAGGATTGATAGGCAGCGGGGACACAAAGCAGAAACACGGACTGGATGCAAAGCAATGCTGTCAATATACTTGGAGAAGAGTGAGCAGAAGTGGAAGGTTAGGAAGGTAGTACTGGATCACAACCATGACCTAGCACCTGTTGGGATGTCCTACCTGATTCGCAGTCATCACAAAATGACGGACGCGGCAAAGGCTCACATTGACGGGATGCATGCGTATGGAATTGGGACGTCGAAAATCTTGGGTCACATGGATGGTATGTCAGGTGGATACTCTTTGTTAGGATTTTTGAAAAAGGATGCGTACAACTACGCGGACAAGATGAGGCGGTCACGAATAGCTGATGGTGATGCGAATGCAACGTTGGTTTACCTTGAGGGAAAGGCTGCTATTGACCCTATGTATGTTGCACGCTACAACCTCACAAAAGATGAAAGGCTTGGTAACATGGTTTGGGCTGATGGGAATAGCCGGTCTGATTTTCAGTGTTTTGGAGATGTCTTAGCGTTTGACTCCACTTATAGAAAAAATAGATACAAACGTCCAGTAGTGATTTTTTCAGGCTCAAACAACCATAAGCAAACTACTATTTTTGGTTTTGGGTTGTTGATTGATGAAACAGTCTCGTCGTATACGTGGATGTTACAGAATTTGCTAGAGGTTATGTGCCAAAAGAAACCTTGTGTAGTTGTTACTGACGGGGACAAAGCAATGATAAAAGCTGTGAAGTCGGTTTTACCTGAGGCAACCCATCGTTTGTGTGCGTGGCATGTGGAAAAAAACGTGACATCAAATGTAAAAGACGAACGCCTCCGCAGTTTGTTCAAGCGTTGGTTGTACATGGACATGGAGGTTAATGAATTCGAAGAGGATTGGGCTGCAGCAATTGAAGAGTTTGGGCTGCAAGACAGTAGTTGGGCAAGGCACATGCATGAGAAGCGAAAGCTATGGGCAAACGCGTATTTGCGTGACAAGTTTTGCGCCGGATTCCGGACTACGTCGCGATGTGAGGGAATAAATGCTGTGGTTAACAAATTTTCGAAGTCAAGCCATACTATCCTCGAGTTAGTGCAAAATCTAGAGCTAGTCGTCCGTGAATATCGGAACAAAGAGATGTTGCTACAGTTTAACTCCATTTACACCACTCCGGTTATGACCACATGTTTGAGGTCAATAGAGATAGCTGCTGCTAGTGTTTATACTCGAGAGTTTTTCGCAGATGTTAGGAAAGAGATTGAAGGAGCTGGAGCAGTTAATCTACTTACGAAAAAACGGTGCTTGAATACAACCGTTTATTATCTAGAGGAATATGAGAAACCTGATGTTCAGGTAATGGCCGCCTTCGGGAGAGGTACTGGAAAACTCAACTGTCAATGCTTCTTTTGGGAAAAGAACGGGTACCCGTGCAGGCATATGTTCTTTGTGATGAAAGCAGAGCACCTGCGGGAAATACCTGAAAGATTGGTCCTGTGA 1803 0.4493 MDANGGEAIGECGGGVSDVNEEMNAEEVGGDEVQEEHLPEGEPGFDLGADDILNQVWNSVEDAYEFYRRYGRVNGFGVRKGDSDKDSHGNVVRYRFFCNKEGLREIKHYNRIDRQRGHKAETRTGCKAMLSIYLEKSEQKWKVRKVVLDHNHDLAPVGMSYLIRSHHKMTDAAKAHIDGMHAYGIGTSKILGHMDGMSGGYSLLGFLKKDAYNYADKMRRSRIADGDANATLVYLEGKAAIDPMYVARYNLTKDERLGNMVWADGNSRSDFQCFGDVLAFDSTYRKNRYKRPVVIFSGSNNHKQTTIFGFGLLIDETVSSYTWMLQNLLEVMCQKKPCVVVTDGDKAMIKAVKSVLPEATHRLCAWHVEKNVTSNVKDERLRSLFKRWLYMDMEVNEFEEDWAAAIEEFGLQDSSWARHMHEKRKLWANAYLRDKFCAGFRTTSRCEGINAVVNKFSKSSHTILELVQNLELVVREYRNKEMLLQFNSIYTTPVMTTCLRSIEIAAASVYTREFFADVRKEIEGAGAVNLLTKKRCLNTTVYYLEEYEKPDVQVMAAFGRGTGKLNCQCFFWEKNGYPCRHMFFVMKAEHLREIPERLVL* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3130 600 PANTHER OS02G0262500 PROTEIN 51 586 - -
Ahy17g3130 600 Pfam FAR1 DNA-binding domain 65 155 IPR004330 -
Ahy17g3130 600 Pfam SWIM zinc finger 564 582 IPR007527 GO:0008270
Ahy17g3130 600 MobiDBLite consensus disorder prediction 30 44 - -
Ahy17g3130 600 MobiDBLite consensus disorder prediction 25 47 - -
Ahy17g3130 600 Pfam MULE transposase domain 277 371 IPR018289 -
Ahy17g3130 600 ProSiteProfiles Zinc finger SWIM-type profile. 552 590 IPR007527 GO:0008270
Ahy17g3130 600 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 586 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3130 Ahy-Chr17 133017428 133019230 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g3130 MULE 7.10E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3130 - - aip:107633775 1132.47