Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3129 ATGTTGAAAGAATTTCAGAAGGCACAGTGTCCTGCAGCAGAGAGGGAAACTGCTTACACCCCATTTGTTCCACAAGCTGCTCCATCTAGCTATACAGCTAATGAAGCAGATGCTAATTCTGGTAAGACTCCAGAACAGCGTGCCCTTCTTGTGGAATCCAGAAGGCAGGAGGTCTTGTTTTTATACAATGAGATTGCCTTCAATGAGGCTATCATTGAAGAAAGAGAGCATGGCATTCAAGCAATTCAGCAGCAAATTGGTGAAGTAAATGAAATTTTTAAAGACCTTGATGTGCTTGTGCATGAACAAGGAACTATGAATGGTTTAGTTGTTATTTCTCATCCTATGGTTTAG 354 0.4096 MLKEFQKAQCPAAERETAYTPFVPQAAPSSYTANEADANSGKTPEQRALLVESRRQEVLFLYNEIAFNEAIIEEREHGIQAIQQQIGEVNEIFKDLDVLVHEQGTMNGLVVISHPMV* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3129 117 MobiDBLite consensus disorder prediction 23 41 - -
Ahy17g3129 117 Gene3D - 1 106 - -
Ahy17g3129 117 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 69 106 IPR000727 -
Ahy17g3129 117 CDD SNARE_Qa 72 106 - -
Ahy17g3129 117 PANTHER SYNTAXIN OF PLANTS PROTEIN 2 106 - -
Ahy17g3129 117 SUPERFAMILY t-snare proteins 2 104 IPR010989 GO:0016020|GO:0016192
Ahy17g3129 117 MobiDBLite consensus disorder prediction 1 45 - -
Ahy17g3129 117 PANTHER SYNTAXIN 2 106 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3129 Ahy-Chr17 133008246 133011942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3129 1 106 SNARE and Associated Proteins AT5G46860 73.832 2.20e-47 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3129 - K08488 aip:107608492 222.631