Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3115 ATGGAGTTCGCTAACCTGGATGAGGCGTGTGTTTTCTATGAGCAATACAGTCGAGCAAAGGGTTTTGCCATGCGACAAGGGAAGAAAATGAAGAATAGGAAGGGTGAAATTGTTCGCTACACGTACCTGTGTAATAGAGAAGGATTTAGACATAGAAAATGGCTTCAGATGCAAGATCGGAAGAGGGAGCACAAGGTTATAACCCGTTGCGGGTGTCAGTTTGAGATGAGGATAAAGCGAAAAGCTGATAGCACCAGTTGGTATGTGTGTCGTTTTGTGGATGAGCATAACCACGACCTTCTTCCAGAAAAGTTTGTGTTATACTTGCCAGCTTACAGGAAAATATTAGATGTTGATGTAGCCCACATCGAAAGTTTGAGGCGGCAACGTGCAATGCACTGCGGCGATGTGAATGCCGCATTACGGTATTTCAATTCTTGTGCAAGGGCAGATGAGAACATGTATTGGCGATACCAGGTTGGGGATGAGCAACAAATGTGTGATCTGTTTTGGAGTGACGGGTGTAGTCAACATGATTACAAAATATTTGGTGATATTTTGGCATTTGATGCGACGTATGGGCGAAACAAGTACAATCTGCCGGTGATTGTGTTTTCTGGGGTGAACCACCATAACCAAACATGTGTTTTCGGCATAGCCATGGTGTCTTCTGAAACACAAGCGGCATATGTGTGGGTGTTGGGAAGGTTTTTGGAGTGCATGGGAGGGAAAGCGCCTAAGGCAGTTATTACTGATGGGGATAGAGCAATGCGGCTTGCCATTCAGGAAGTGTTTCCAGAGGCTCATCACAAGCTTTGTGCATGGCACCTACTGAAAAATGCAACCGTGAATGTGTGTAAGCCTCGCTTCACAACTCTGCTTAGAAATTGCATGCTTGCTAATGTTGAGGTTGAGGAGTTTGAGAGGCAATGGGATGCAATGATGGATGAATGTGGGGTGTGGGAAGTAGAGTTTGTGGAAAGGAGATACGGAATCTTGGAGTTTGTCACGAACTTCCAACGGTGTGTTGATTTCCTAAGGAATAATGAGGAGGAGCTTGACTTCAGGTCGTTGTATGGGAGCCCCGTTCTCCAAACTCAGTTTCCAGAGCTAGAGAAGTCAGGTGCATTGAACTATACGAAGGAAATATTTGTGCGCTTTAGAGATGCGCTAAAGAAAAGCGTGCGGATTACTATTGTAGAGTGCAACAAATTGGACGATCAGACGGTTTATGTGACACAGAAGTATCGTAGGCCACAGTTCCGGTGGACTGTTGCCCACCATTTTCGAGAGGATTCCTTTTTTTGTAGTTGCTTGAGGTTTGAGTCGTTCGGACTACCTTGTGTGCACATACTTGCGGTGTTGGTGCAGTTGGACATAGGTTGTCTTCCGAAAAGCATAGTGTTGAAATGCTGGTCGAAGACTGCCAAGGTTGAGCTGGAGGGGTCTTCCCCCATGAACGAAGAGGGGGATGTGAATGCAGTATACAAGGTTCGAGTGGGTGCTTTCCTGTAG 1515 0.4587 MEFANLDEACVFYEQYSRAKGFAMRQGKKMKNRKGEIVRYTYLCNREGFRHRKWLQMQDRKREHKVITRCGCQFEMRIKRKADSTSWYVCRFVDEHNHDLLPEKFVLYLPAYRKILDVDVAHIESLRRQRAMHCGDVNAALRYFNSCARADENMYWRYQVGDEQQMCDLFWSDGCSQHDYKIFGDILAFDATYGRNKYNLPVIVFSGVNHHNQTCVFGIAMVSSETQAAYVWVLGRFLECMGGKAPKAVITDGDRAMRLAIQEVFPEAHHKLCAWHLLKNATVNVCKPRFTTLLRNCMLANVEVEEFERQWDAMMDECGVWEVEFVERRYGILEFVTNFQRCVDFLRNNEEELDFRSLYGSPVLQTQFPELEKSGALNYTKEIFVRFRDALKKSVRITIVECNKLDDQTVYVTQKYRRPQFRWTVAHHFREDSFFCSCLRFESFGLPCVHILAVLVQLDIGCLPKSIVLKCWSKTAKVELEGSSPMNEEGDVNAVYKVRVGAFL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3115 504 Pfam SWIM zinc finger 435 455 IPR007527 GO:0008270
Ahy17g3115 504 Pfam FAR1 DNA-binding domain 12 102 IPR004330 -
Ahy17g3115 504 Pfam MULE transposase domain 186 280 IPR018289 -
Ahy17g3115 504 SMART 26again6 434 461 IPR006564 GO:0008270
Ahy17g3115 504 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 481 IPR031052 GO:0006355
Ahy17g3115 504 ProSiteProfiles Zinc finger SWIM-type profile. 421 459 IPR007527 GO:0008270
Ahy17g3115 504 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 1 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3115 Ahy-Chr17 132796445 132798187 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g3115 MULE 1.70E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3115 - - ahf:112763993 1055.05