Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3090 ATGCCAACAAACTCGCAGCAACAGTTTCACGCCTTCTACGAAGGATGGATCCAACGCAAACAGACTCTCCTCGACGAGCTTCTCACACTTTCCAACGCTCCCGACTCCCAACACAAACACACCGCTCTCATTGAATCCGTTATCTCCCACTACCAACAATACTTCGAGCACAAAACACGCCTCCAAAACGACGACGTTTTGCTTCTCTTCTCTCCCACCTGGCTCTCCACCTACGAGCGAGCACTTCTGTGGATGGGAGACTACAAGCCTTCCTTAATCCTCCGCCTCGCCGACACCGCTCTTCAAGATCTCACGGCGGACCAGATCCGTGCGATTGAGAGGGTCAGGGCGGAGACTAGGACCGGGGAGAGGGAGCTTTCTGCTGCAATGGCGGCGTTTCAGGAGAGCGTGGCTAGTCCGCGCGTGTTGCAACGCGCTAGGAGAGTGGGGAGGTTGTTGGATGGGGAGATTGATGAGCTTGATGAGTCTATGGGGGGGATGAGGAACGCCGTGGGAGAGCTTTTTCAGAGAGCGGATGAGTTGAGGGTGGCTACGGTTAGCAAGGTCGTGGCGGTTCTTTCTCCGCCGCAGACGGTTAGGTTTCTTGCCGCGGCCTTAGGGTTTCAGCTACGTGTCAGGCGGTGGGGGCTGGAAAGGGACCAGTCCCGTTGA 672 0.5655 MPTNSQQQFHAFYEGWIQRKQTLLDELLTLSNAPDSQHKHTALIESVISHYQQYFEHKTRLQNDDVLLLFSPTWLSTYERALLWMGDYKPSLILRLADTALQDLTADQIRAIERVRAETRTGERELSAAMAAFQESVASPRVLQRARRVGRLLDGEIDELDESMGGMRNAVGELFQRADELRVATVSKVVAVLSPPQTVRFLAAALGFQLRVRRWGLERDQSR* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3090 223 PANTHER - 3 222 - -
Ahy17g3090 223 Pfam Seed dormancy control 24 97 IPR025422 GO:0006351|GO:0043565
Ahy17g3090 223 ProSiteProfiles DOG1 domain profile. 6 222 IPR025422 GO:0006351|GO:0043565
Ahy17g3090 223 PANTHER TRANSCRIPTION FACTOR HBP-1B 3 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3090 Ahy-Chr17 132372634 132373595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3090 9 213 bZIP Transcription Factor Family AT3G12250 27.014 4.83e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3090 - - aprc:113865861 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3090 17 132372634 132373595 Ahy8g0794 8 15795585 15796256 hybridization