Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3081 ATGCTCACAAGAAGAAAAATCCTCAATTTATTCTCAACCCAATTCGCTTCTCACCAATTCAATGCAGTTTCGAAGTTGTCACGAGTTCCTTCGCACCCTTATTCTGAAATCCACAAAACCCTAAACCCCTTTAGGGTTTTTCTTTTGTGTGCATGGAATTCGACGCAGGCATCGAAATTTCCCGAATACGAGATGCCATCGGTGACGTGGGGTGTGATTCAAGGTCGCAAGGAGAAGCTGGTATCGCGGGTCATCGTATTCGACTTCCTCAGGGGTTTGGGAATCGTCCCTGACGAGTTGCAGGACCTTGAGCTACCTTCGACAGTTGAAGTCATGAGGGAGCGCGTGGAGTTCCTCCAGAAACTAGGGCTAACAATTGATGACATCAACGATTACCCTTTGATGTTGGGATGCAGTGTGAGGAAGAACATAATTCCTGTTTTGGGGTACTTGGAAAAAATTGGGATTTCAAGATCCAAACTTGGGGGATTCATTAAGAGCTACCCGCAGGTATTGCATGCTAGTGTGATTGTTGAGCTTGTCCCTGTTGTGAAGTTCCTTAGGGGACTTGATGTGGAGAGGGAGGATATTGGGTATGTGTTGCAGAAGTACCCTGAACTTCTAGGGTTCAAGCTTGAGGGTACTATGAGTACATCAGTGGCTTATCTTGTTAGTATTGGGGTTAATCCTAGGGATATTGGTCCCATGGTGACTCAGTATCCTTATTTTTTGGGGATGAGAGTTGGGACTATGATCAAGCCTTTTATTGATTACTTAGTCTCTTTGGGACTGCCAAAGAAGATTTTGGCTAAGATGTTGGAGAAGAGGACCTATTTGCTTGGATATGATCTTGAAGAGACTATCAAGCCAAATGTGGATTGTTTGATTAGCTTTGGGATAGGGAGGGAGTGTTTGCCTTCGGTTATTGCACAGTATCCTCAGATTCTTGGATTGCCCCTCAAAGCCAAGTTGTCTTCGCAGCAGTACTTCTTCAGTTTAAAGCTTAAGATTGATCCTGAAGGTTTTGCGCGAGTCGTGGAGAAGATGCCGCAGGTGGTTAGCCTTCACCAAAACGTGATCATGAAGCCGGTCGAGTTCCTCCTCGGAAGGGCTATAGCACTGCATGATGTGGCTAGCATGGTGGTCAAGTGTCCGCAGTTAGTAGCACTGAGAGTGGAGCTCATGAAGAACAGTTTTTACTTCTTTAAGAGTGAGATGGGAAGACCACTGAAAGAGCTTGTAGAGTTCCCTGAATACTTTACTTACAGTCTGGAGTCTAGGGTCAAACCAAGATACCAAAGGCTAAAGAGCAAGGGGATAAGGTGTTCATTGAATTGGATGCTGAATTGTAGTGACCAGAGATTTGAAGAGAGGTTGCAGGGTAATTATATTGAGACTGAAAGTATAGGTCCGACATTTTTAATGGGTGGAAAATTGAACCTGCCAGCTCTCTCACGCCACTCTCGTCTCCGATGTGTCACTTCTTTCTTGGTCTGGCACTCACCGTTTTGGAATCAAGCTCGTCGCACTCTGTGTACTCACCATCTCAAGCTCAGACACCGCTTTTCTGGGCTCGCTTCGCGGGCGGCAGAACCACACGGAACCCAGTCACGCGCCTTCGCGTACGCTCGTCGTCGCCGGAAGCAGAGGCAGCAGGTCCCGGTGGGCTGGTCTTGTTCGTCTTCTTGCTTGGAGCCTCACCGTCAGCTTCCTTGGCGCAACCCGATTTGTGCTTTAAATTTGGATGACATTTTAAGGTTTATATTTGGATGA 1773 0.4664 MLTRRKILNLFSTQFASHQFNAVSKLSRVPSHPYSEIHKTLNPFRVFLLCAWNSTQASKFPEYEMPSVTWGVIQGRKEKLVSRVIVFDFLRGLGIVPDELQDLELPSTVEVMRERVEFLQKLGLTIDDINDYPLMLGCSVRKNIIPVLGYLEKIGISRSKLGGFIKSYPQVLHASVIVELVPVVKFLRGLDVEREDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPFIDYLVSLGLPKKILAKMLEKRTYLLGYDLEETIKPNVDCLISFGIGRECLPSVIAQYPQILGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIALHDVASMVVKCPQLVALRVELMKNSFYFFKSEMGRPLKELVEFPEYFTYSLESRVKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGNYIETESIGPTFLMGGKLNLPALSRHSRLRCVTSFLVWHSPFWNQARRTLCTHHLKLRHRFSGLASRAAEPHGTQSRAFAYARRRRKQRQQVPVGWSCSSSCLEPHRQLPWRNPICALNLDDILRFIFG* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3081 590 Gene3D Transcription termination factor 3, mitochondrial 128 252 IPR038538 -
Ahy17g3081 590 Gene3D Transcription termination factor 3, mitochondrial 253 466 IPR038538 -
Ahy17g3081 590 Pfam mTERF 148 456 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 SMART mt_12 198 229 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 SMART mt_12 410 441 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 SMART mt_12 343 373 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 SMART mt_12 162 193 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 SMART mt_12 378 409 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 SMART mt_12 306 338 IPR003690 GO:0003690|GO:0006355
Ahy17g3081 590 PANTHER EXPRESSED PROTEIN 52 490 - -
Ahy17g3081 590 PANTHER CGI-12 PROTEIN-RELATED 52 490 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3081 Ahy-Chr17 132267186 132272960 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy17g3081 mTERF 1.10E-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3081 K15032 - gmx:100809590 799.66