Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy17g3061 | ATGAACAACTACTTCTTCCTCTTCCTCTTCCTCTCTTCTTTTACCTATTCATCAGGGGTGCGCTTGGACATTCACGATAAACATGTGGTTATGGATAATGGCATAGTTGAGGTCACAATATCAAATCCTGAAGGATTTGTTACAGAGATTCGGTATAATGGAATCGACAATTTGCTTGAACTTCTTAACAAGGAATCTAACCGAGGGTACTTTGATATGGTGTGGGATGAAGGTAAGTCAAAGAGGAAAAAAGGTGAATTTGACAGAATGGAAGCTACAAATATGAGTGTGATAGTGGAAAATGAGGAACAAGTGGAGCTATCATTCACCAGAATGTGGAATTCTTCCCTTCAGGGATTGTATCCCCCACTCAACATTGATAAAAGGTTCCATTACATGGTGGTAGCAGGGGACAGACAGAGATTTATGCCTCTTCCTGATGATAGAGAAGAAGGAAGAGGCCAAGTTCTTGCTTATCCTGAAGCTGTCTTGCTTCTCAATCCTATTGAGCCTCAATTCAAAGGAGAGGTGGATGACAAGTATCAATATTCATGTGAGAGTAGAAAGAACCAAGTTCATGGTTGGATATCCATGGATCCACCCAAGTCCACCGGCTTCTGGATCATCACCCCAAGCAATGAGTTCCGATCCGGCGGCCCGCTCAAACAATATCTCGCTTCTCACGTCGGCCCCACTTCTCTATCCGTATTCCATAGCACACACTATTCCGGGGTAGATCTGATAATGAGGTTTAGGCCCAATGAAGCCTGGAAGAAAGTATATGGGCCCATATTTATATATCTTAATTCACTCTCTAATGGAGAAAGCCCAACCGGGCTCTGGGACGACGCCAGACAACAGATGGTGAATGAAATTGAAAGCTGGCCCTATAAGTTTCCAGCTTCGGAGGAGTATGTGAAAGCTGAGCAAAGGGGTCAAGTTGAAGGAAGATTGCTTGTCCGAGACAGGTACATGAGTGATGCATTCATCCCAGTTAGCAGTGCTTCTGTGGGATTAGCTTCTCCAGGAGAGCCTGGCTCTTGGCAAAGGGAATCCAAGGGTTATCAATTTTGGACCATTACTGATGATAAAGGCTATTTCTCAATTACTAACATACTCCCTGGGGAATATAATCTCTACTCCTGGGTCAAAGGATACATTGGTGACTATAAATATGATAAAGTCATTAACATAACTTCAGGGAGTGAAGTTAATGTGGGTGAAATTGTTTATGAGGCACCAAGAGAAGGTGCTACTTTGTGGGAAATAGGTATACCTGATCGTTCTGCTGCTGAGTTCTATGTTCCTGATCCTAACCCCAAATACATTAACAGAATTTATGTCAACCATACAGATAGGTATAGGCAATATGGTTTGTGGGAGAGATATGCTGATTTGTATCCAAAAGAAGACTTAGTATACAATGTTGGCACAAGTGACTATACAAAAGATTGGTTCTTTGCTCAGGTTAACAGGAAGAAGGAGAATAAGACATACCAAGCAACCACTTGGCAAATTAATTTCAATTTGGAAAATGTGAATGCCAATGGAACTTACAAATTGCGAGTGGCTCTGGCCTCTGTACATTATGCCGAGTTACAGATTCGGGTGAAGAATTCATCAGAAGCAAATCCACCATTATTTACAAGTGGAGTTATTGGATCAGAAAACACCATAGCTAGACATGGAATTCATGGGTTCTATTGGCTTTTCAACGTTGATATAAAAGGCACTCTTCTTGCACAGGGAAATAATTCAATCTTTTTTTCACAACCCAATAATACAAGTCCATTTCAAGGAATTTTGTATGATTATATTCGTCTAGAAGCACCACCCCATCACACAAATTTCACACCAAAATTAAATATTCTTCCAAATTAA | 1881 | 0.4099 | MNNYFFLFLFLSSFTYSSGVRLDIHDKHVVMDNGIVEVTISNPEGFVTEIRYNGIDNLLELLNKESNRGYFDMVWDEGKSKRKKGEFDRMEATNMSVIVENEEQVELSFTRMWNSSLQGLYPPLNIDKRFHYMVVAGDRQRFMPLPDDREEGRGQVLAYPEAVLLLNPIEPQFKGEVDDKYQYSCESRKNQVHGWISMDPPKSTGFWIITPSNEFRSGGPLKQYLASHVGPTSLSVFHSTHYSGVDLIMRFRPNEAWKKVYGPIFIYLNSLSNGESPTGLWDDARQQMVNEIESWPYKFPASEEYVKAEQRGQVEGRLLVRDRYMSDAFIPVSSASVGLASPGEPGSWQRESKGYQFWTITDDKGYFSITNILPGEYNLYSWVKGYIGDYKYDKVINITSGSEVNVGEIVYEAPREGATLWEIGIPDRSAAEFYVPDPNPKYINRIYVNHTDRYRQYGLWERYADLYPKEDLVYNVGTSDYTKDWFFAQVNRKKENKTYQATTWQINFNLENVNANGTYKLRVALASVHYAELQIRVKNSSEANPPLFTSGVIGSENTIARHGIHGFYWLFNVDIKGTLLAQGNNSIFFSQPNNTSPFQGILYDYIRLEAPPHHTNFTPKLNILPN* | 627 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy17g3061 | 626 | PANTHER | RHAMNOGALACTURONATE LYASE B-LIKE PROTEIN | 6 | 130 | - | - | |
Ahy17g3061 | 626 | PANTHER | RHAMNOGALACTURONATE LYASE B-LIKE PROTEIN | 129 | 610 | - | - | |
Ahy17g3061 | 626 | SUPERFAMILY | Galactose-binding domain-like | 417 | 609 | IPR008979 | - | |
Ahy17g3061 | 626 | Pfam | Polysaccharide lyase family 4, domain II | 334 | 405 | IPR029413 | - | |
Ahy17g3061 | 626 | Pfam | Rhamnogalacturonate lyase family | 24 | 130 | IPR010325 | - | |
Ahy17g3061 | 626 | Pfam | Polysaccharide lyase family 4, domain III | 419 | 608 | IPR029411 | - | |
Ahy17g3061 | 626 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 6 | 130 | - | - | |
Ahy17g3061 | 626 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 129 | 610 | - | - | |
Ahy17g3061 | 626 | Gene3D | - | 166 | 282 | IPR014718 | GO:0030246 | |
Ahy17g3061 | 626 | CDD | RGL4_M | 310 | 409 | IPR029413 | - | |
Ahy17g3061 | 626 | CDD | RGL4_N | 25 | 270 | - | - | |
Ahy17g3061 | 626 | Gene3D | - | 306 | 407 | - | - | |
Ahy17g3061 | 626 | CDD | RGL4_C | 421 | 609 | - | - | |
Ahy17g3061 | 626 | Gene3D | - | 416 | 609 | - | - | |
Ahy17g3061 | 626 | SUPERFAMILY | Starch-binding domain-like | 306 | 407 | IPR013784 | GO:0030246 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy17g3061 | Ahy-Chr17 | 131844186 | 131869609 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy17g3061 | 18 | 611 | Polysaccharide Lyase | AT1G09890 | 61.076 | 0.0 | 794 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy17g3061 | K18195 | - | gmx:100786488 | 957.977 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy17g3061 | 17 | 131844186 | 131869609 | Ahy7g1754 | 7 | 65197892 | 65227595 | hybridization |