Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy17g3060 | ATGTCGTCGCAGGCAGTGAAGTTGCGTGCCGACGACAATTATGTTGTGATGGACAATGGTATACTTGAAGTGTATTTTTCCAAAAAGGGTGGATTTATCACTGCAATACAATATAATGGTGTTGATAATTTGCTTGAAGTTCTTAATGAAGCAGATGATAGAGGGTATTGGGACATTGTTTGGAATGAAGCAGATAGCACAGGAACAACCGGGATATATGAAAGGGTAATGGGGACAAGTTATGAAGTTATAGTGCAAAATGATGAAAAATTGGAGATTTCATTTACCAAAACATGGGATCGATCATCCATGGAGGAAAAGCAGTCTCCTCTAAATATTGACATTAGATATGTGATGCTACGCAATTCCTCTGGCTTGTATTGTTATAGCATCTTTGAACACCGAAAAGAATGGCCTGCTTTCAACGTTCCCCAAATCAGAATGGTCTTTAAGCTTCGAAAAGATAAGTTTAATTATATGGCTATAGCGGATAATAAGCAAAGGCTAATGGCTCTTCCAGATGACCGGTTACCGACAAGAGGAAGAACACTTGTTCCACCTGAAGCTGTATTGCTTGTTGATCCTATTGAACCACAGTTCAAGGGAGAGGTGGATGACAAGTATCAATACTCAAGCAATAACAAAGATATTAAGGTGCATGGATGGATAAGCTCCAAATCTGAAACTAATCCTGCAATGGGGTTTTGGGTAATTATACCTACCAATGAGTTCCAATCAGGTGGCCCTCTTAAACAGAACCTCACCTCTCATGTTGGACCTATTAGTCTCGCAATGTTTCTGAGTTCGCATTACGCAGGAGAGGATGTTGTTATGAGAGTCCAAAGAAATGAGTCATGGAAAAAGGTTTTTGGGCCAATCTTTGTTTATCTTAACACTTCATCAGAAAACCAACTCCAACCATCACTATGGAATGATGCCAAAGACCAGATGAGCAAACAAGTTCAAAGCTGGCCCTATGATTTTCCAGCTTCAGGGGATTTTCATAAGTCTCACCAACGAGGCAGTGTTTATGGCACATTAAAAGTCCAAGACAGGTTCATAAGTGATCACCACATATTGGCAGAAGGTGCATATATTGGTCTGGCACCACCAGGAGAACCTGGATCCTGGCAAACAGAATGCAAGGGATATCAATTTTGGACTCAAACCAATAAAAGAGGCTTTTTCTCTATCAACAATATACACAGTGGGAATTACAATCTTTATGCTTGGATCCCTGGTTTCATTGGAGATTATTGTAACAATGTTGTCCTCACCATCAAGCCAGGTAGCAAAGTAAATGTTGGTGAGATTGTATATGAACCCCCAAGAAATGGACCAACATTATGGGAAATAGGCATTCCTGATCGCTCTGCAGCTGAATTTTATGTTCCTGATCCTAATCCAAATTACATTAACACACTTTATCTCAATCATCCAGATAGGTTTAGGCAGCATGGATTATGGGAAAGATATGCAGATTTATATCCAAATGAAGATTTGATTTACACAGTTGGACATAGTGACTATAGAAAACATTGGTTCTTTGCCCATGTTACCAGGAAGAGAGATGATGGCACTTACCATGGAACAACATGGCAAATTAAGTTCAAGCTTCATAATGTTCAGAAAAATGGAACTTATAAACTGCGACTAGCACTTGCAGCCGTTAATTTCTCCGAATTACAGGTTAGAGTGAATAATCCAAAAGAAGATCCACCGATGTTTACAAGTGGGTTGATTGGGAAGGACAACGCCATAGCTAGACATGGAATTCATGGACTCTATAGACTATACAACATTGATTTATCATCTCATTTACTAGTCAAAGATGATAACATCATATATCTTACACAAACTATAGCTAATGGTCCCTTTCAAGGCATAATGTATGATTATATTCGTTTGGAGGGTCCTCCTTCTCATAAATAA | 1932 | 0.3903 | MSSQAVKLRADDNYVVMDNGILEVYFSKKGGFITAIQYNGVDNLLEVLNEADDRGYWDIVWNEADSTGTTGIYERVMGTSYEVIVQNDEKLEISFTKTWDRSSMEEKQSPLNIDIRYVMLRNSSGLYCYSIFEHRKEWPAFNVPQIRMVFKLRKDKFNYMAIADNKQRLMALPDDRLPTRGRTLVPPEAVLLVDPIEPQFKGEVDDKYQYSSNNKDIKVHGWISSKSETNPAMGFWVIIPTNEFQSGGPLKQNLTSHVGPISLAMFLSSHYAGEDVVMRVQRNESWKKVFGPIFVYLNTSSENQLQPSLWNDAKDQMSKQVQSWPYDFPASGDFHKSHQRGSVYGTLKVQDRFISDHHILAEGAYIGLAPPGEPGSWQTECKGYQFWTQTNKRGFFSINNIHSGNYNLYAWIPGFIGDYCNNVVLTIKPGSKVNVGEIVYEPPRNGPTLWEIGIPDRSAAEFYVPDPNPNYINTLYLNHPDRFRQHGLWERYADLYPNEDLIYTVGHSDYRKHWFFAHVTRKRDDGTYHGTTWQIKFKLHNVQKNGTYKLRLALAAVNFSELQVRVNNPKEDPPMFTSGLIGKDNAIARHGIHGLYRLYNIDLSSHLLVKDDNIIYLTQTIANGPFQGIMYDYIRLEGPPSHK* | 644 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy17g3060 | 643 | Gene3D | - | 336 | 436 | - | - | |
Ahy17g3060 | 643 | Gene3D | - | 446 | 637 | - | - | |
Ahy17g3060 | 643 | SUPERFAMILY | Galactose mutarotase-like | 11 | 301 | IPR011013 | GO:0003824|GO:0005975|GO:0030246 | |
Ahy17g3060 | 643 | CDD | RGL4_M | 339 | 438 | IPR029413 | - | |
Ahy17g3060 | 643 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 1 | 642 | - | - | |
Ahy17g3060 | 643 | Pfam | Polysaccharide lyase family 4, domain II | 362 | 434 | IPR029413 | - | |
Ahy17g3060 | 643 | PANTHER | LG27/30-LIKE GENE | 1 | 642 | - | - | |
Ahy17g3060 | 643 | SUPERFAMILY | Galactose-binding domain-like | 445 | 637 | IPR008979 | - | |
Ahy17g3060 | 643 | Pfam | Rhamnogalacturonate lyase family | 4 | 204 | IPR010325 | - | |
Ahy17g3060 | 643 | CDD | RGL4_C | 450 | 637 | - | - | |
Ahy17g3060 | 643 | Gene3D | - | 5 | 314 | IPR014718 | GO:0030246 | |
Ahy17g3060 | 643 | CDD | RGL4_N | 6 | 301 | - | - | |
Ahy17g3060 | 643 | Pfam | Polysaccharide lyase family 4, domain III | 448 | 636 | IPR029411 | - | |
Ahy17g3060 | 643 | SUPERFAMILY | Starch-binding domain-like | 336 | 436 | IPR013784 | GO:0030246 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy17g3060 | Ahy-Chr17 | 131810910 | 131824948 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy17g3060 | 1 | 639 | Polysaccharide Lyase | AT1G09890 | 60.312 | 0.0 | 816 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy17g3060 | K18195 | - | gmx:100815677 | 994.956 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy17g3060 | 17 | 131810910 | 131824948 | Ahy17g3060 | 17 | 131810910 | 131824948 | ECH | |
Ahy17g3060 | 17 | 131810910 | 131824948 | Ahy8g0762 | 8 | 15107747 | 15129447 | hybridization |