Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3035 ATGATGGCCTACACAGGTTCAATGCAGTTGCCTCGTGAAATTAGGCTACACAGTAATAGTGGGATCTGTAGTTTCCATAATAAGCAGAATTCTTCAGCACGCCATCTTTTCAATAAAGTACACGCCCCAATAAGACATGTGCCTTCCAGATGTAAAGTTTTCATATGTAGGTCTGTCCTAATACCAGGTGGAGGGAGTGGGACTCCACTCATGAAATCTGCTGCTGTATTTTTAACAAGGTCGCAGGAGACTTTAAGTGGGAACCCTGTTTTGCTTCGATTGATCCCAGCACTTGGTATCATTGCCTTTGCTGTTTGTGGCCTTGAACCACTCATACGTCTTGGCAGAGTTCTTATTCTTCAAAGACCTGACAGTACTTGGAAGAAAAGTAGCTCCAGATATATCATGACATCTTACTTCCAGCCCTTGCTATTGTGGACTGGGGCAATGCTCATATGCAGGGCACTAGATCCACTTGTCCTACCATCTGAGGCTAGCCAGGCTGTGAAGCAACGGATGCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTTATTCAACAAGCACAAAAATTCTTTATGGAGGCAAATGACTCCAGTGATTCAAGAAATGTGGGATTTGACTTTGCTGGGAAAGCTGTATATACTGCTGTATGGGTTGCTGCAGTGTCACTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAGGTGGTTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTTGCAGGTCGCGAGATATTCACAAACTTCTTGTCGAGTATAATGATCCATGCAACTCGGCCGTTTATTATGAATGAGTGGATTCAAACGAAGATTGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTAGGATGGTGGTCACCAACAATTGTGAGAGGTGATGATCGGGAAGCAGTTCATATTCCCAATCATAAGTTCACTGTAAATGTTGTGAGAAATCTGACTCAGAAATCCCATTGGCGCATCAAGAGCTACATTGCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGGAAGGTTTTGGCCAAAAATCCTCAAGTAGAGCAACAAAAGTTGCATAGAAGGGTGTTTCTGGAGAATGTCAATCCGGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCACATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATTCTCTTGGATCTTCTTAGAGTTGTCACTCACCATCGAGCTCGGCTAGCCACTCCCATCCGTACAGTTCAGAAAATATACAGTGAGGCTGACTCGGAAAATATACCTTTTGGGGACACTATTTTCACTCGATCCAGAGCAGCAGGAAATCGCCCATACCTCCTTATAGAACCGCCATATAAAGTTAATGGTGAGGATAAACCTAAACCTTCAGCTCGTTCGACTCGTCCAAATGAGGAAAAAGATGCCAAAGTTGATGAAACCTTGATGTCTGACCCCAAAGGAGATGAGAATTCAGTGGTGACATCAACCACCTCACCTGGTGTAAGCTCCAAGGATAAATCCAAGACAGCTTCTGAAGCCCAGAGTCAGAATCTGGGTTCTAATGGTTCAGTTGAGAAGACCTCCAAAACCTTGCAGCCCAAAAAGGAAAATGCAAATGCAGGAAAGGGAGCAACAGTTCCCCTATCGAAAAACCTTGCACAAAGTGCTGTGCCCGAAACTTCTCCGGTGACTTCACATGAGTCTAGCAAAGGAGAGACAACTTCTGCTAGTCCTTCACCGTTGAAGCAAGATGAAGAGAAATCTGCTGTGTCCTCACCTTCAATTAGGCCTTCCTTGGAAGATAATATCCTCCTTGGTGTTGCTCTCGAAGGTTCAAAACGAACTCTACCGATCGAGGAAGAAATGACTCCCCTTCCTATCCCTGGAGAGTCGCAAGAATTTGCTGTCCAAAGGAATGGGAGTGGACCTCCTGCTACCAAGGATAAGAAGGATCCTAAGCAGAATGATTAG 2037 0.4359 MMAYTGSMQLPREIRLHSNSGICSFHNKQNSSARHLFNKVHAPIRHVPSRCKVFICRSVLIPGGGSGTPLMKSAAVFLTRSQETLSGNPVLLRLIPALGIIAFAVCGLEPLIRLGRVLILQRPDSTWKKSSSRYIMTSYFQPLLLWTGAMLICRALDPLVLPSEASQAVKQRMLNFVRSLSTVISFAYCLSSFIQQAQKFFMEANDSSDSRNVGFDFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIMNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYIAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVTHHRARLATPIRTVQKIYSEADSENIPFGDTIFTRSRAAGNRPYLLIEPPYKVNGEDKPKPSARSTRPNEEKDAKVDETLMSDPKGDENSVVTSTTSPGVSSKDKSKTASEAQSQNLGSNGSVEKTSKTLQPKKENANAGKGATVPLSKNLAQSAVPETSPVTSHESSKGETTSASPSPLKQDEEKSAVSSPSIRPSLEDNILLGVALEGSKRTLPIEEEMTPLPIPGESQEFAVQRNGSGPPATKDKKDPKQND* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3035 678 MobiDBLite consensus disorder prediction 509 550 - -
Ahy17g3035 678 MobiDBLite consensus disorder prediction 570 620 - -
Ahy17g3035 678 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 21 676 IPR045042 -
Ahy17g3035 678 MobiDBLite consensus disorder prediction 476 507 - -
Ahy17g3035 678 SUPERFAMILY Sm-like ribonucleoproteins 263 333 IPR010920 -
Ahy17g3035 678 Gene3D - 279 334 IPR023408 -
Ahy17g3035 678 Gene3D - 173 277 - -
Ahy17g3035 678 MobiDBLite consensus disorder prediction 472 678 - -
Ahy17g3035 678 Pfam Mechanosensitive ion channel 220 427 IPR006685 GO:0016020|GO:0055085
Ahy17g3035 678 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 21 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3035 Ahy-Chr17 131322480 131328852 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3035 18 658 Mechanosensitive Ion Channel Family AT1G58200 55.352 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3035 K22047 - gmx:100796022 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3035 17 131322480 131328852 Ahy17g3035 17 131322480 131328852 ECH