Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3033 ATGTTGTGCTCATTTCATCATCATCACCTTGGGCTTCAGTTCCATTCAACAATGGCCTATTCGGGTTCACATAGGCTACACAGCAATATCGAAAGCTGCGGTTTTTGTCATCCCATGTGTGCAGATCGATTGTGTTTTGTAAATATCAATCATTCGCCAGAGTGTTTGAGGCGGGATTCTTCTGCACTTATCCTATCCAGAGTACATGTCCCACTTAGGCCCTTACGATGTGTTTCGGTGTGCCAGTCCACACTAATACCAGCTGGAGGGTGTGAGGCTCCACTCAGGAATTTGGCTACTATTTCTTTATCAAGGCCACAGTGCACTATATCAGGAAAACCCATTGTACAATTTGTACATCAATTCATCCCTGCCCTTGGTATCATTGGTTTTGCTGTCTGGGGTCTAGAGCCACTTCTGCGCCTGAGCAGGACTCTATTTCTGCAAAAGACTGACAAAAGTTGGAAGAAAAGTAGTTTGCGTTATTTAATGAAATCTTATCTTCAACCTTTGCTGCTATGGACAGGGGTTATGCTCATATGCAGGGATTTAGATCCATTAGTCTTACCATCAGAAACCAGTCAGGCTGTGAAGCAACGGCTGCTGAGTTTTGTGAGATCCTTGTCAACAGTCCTTACATTTGCTTATTGTTCTTCAAGCTTAATTAAGCAAGCACAAAAAAGTTGTATGGAGATGAATGACTCCAGTGATGAAAGGAATATGAGGATTGATTTTACTGGTAAAGCTTTATATACTGCAATATGGGTAGCTGCTGTGTCACTGTTCATGGAGTTGCTGGGATTCTCCACACAGAAATGGTTGACTGCTGGTGGTTTGGGCACAGTATTGCTTTCGCTTGCAGGTCGTGAGATATTCATGAACTTCCTTTCAAGTATAATGATTCATACAACTCGACCATTTGTTGTGAATGAGCGGATTAAAACAAAGATTAAAGATGATGAGGTTTCTGGTAGAGTTGAGCATGTAGGCTGGTGGTCACCAACAATTGTTAGAGGTGCTGATTGTGAAGCAGTACATATTCCTAACCAGAAGTTGAGTGTAAACATTGTAAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCATCTTGCCATCAGTCACTTGGATGTTAACAAGATCAATAATATCCTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAATAGAGCAGAAAAGATTGCATAGAAGGGTTTTTCTGGAGGATATCAATCCAGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTCCGAAGAGTACCTTCGTGTTAAGGAGGCTATTCTCTTGGATCTTCTCAGAGTTATCGATCATCATGGAGCTCGACTAGCGACCCCCATCCGCACAATTCAGAAGATGTACAGTGTCACTGATTCAGAAGCCGATCCATTTGATGAGAACCTATTCACTCGTTCCAGAGCTAAGGCTAACCGTCCATTCTCATCAAAGGATTCACCTTACAATGTTAAGCCTTCAATTCATTCGAACATTACAAACGAGAAGGATACCAAGTTTGAGGAAACCTTGACATCTGACTTAAAAGTAGATGACGACTTTGCAGGGCCATCAACCTCCACATCCAGTGTAAACTCCAGCAACGAGAAATTTAACCCTTCTGAATCCAAAACCAAGAATATGGATCGTGACAATTCGGTCCAGAAGACATCCAAATCCATGCAGCCCAAGGAAAAAGCAGGAAGTGCAGGAAACAGGACATCACCGGAATTTTTGTTGACTTCCAAGAAGTCAGGCAGAGGAGATGCTACTAATTCTGTTACCTCTTCACCATCAAAGAAAGGTGAAGAAAAAGATAAATCTGGTGGCTCATCATCATCAACTATTCCTTCCTTGAAAGAGAATATTGTTCTTGATGCTGCCTTGCTGGGAGCGAAACGAACACTTGAAATAGACGACAAAATTAGTCCACCTATCGCTGCAGAGCCTCCAGAATTCGCTATCCAACAGAAAGGATGTGAACCTCGTGGAATTAAGGATCACAAGGGTTGTAAGAAGTCTCCTAATGCTAAGCAGAGTGATTAG 2085 0.4182 MLCSFHHHHLGLQFHSTMAYSGSHRLHSNIESCGFCHPMCADRLCFVNINHSPECLRRDSSALILSRVHVPLRPLRCVSVCQSTLIPAGGCEAPLRNLATISLSRPQCTISGKPIVQFVHQFIPALGIIGFAVWGLEPLLRLSRTLFLQKTDKSWKKSSLRYLMKSYLQPLLLWTGVMLICRDLDPLVLPSETSQAVKQRLLSFVRSLSTVLTFAYCSSSLIKQAQKSCMEMNDSSDERNMRIDFTGKALYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLLSLAGREIFMNFLSSIMIHTTRPFVVNERIKTKIKDDEVSGRVEHVGWWSPTIVRGADCEAVHIPNQKLSVNIVRNLSKKSHWRIKTHLAISHLDVNKINNILADMRKVLAKNPQIEQKRLHRRVFLEDINPENQALMILISCFVKTSHSEEYLRVKEAILLDLLRVIDHHGARLATPIRTIQKMYSVTDSEADPFDENLFTRSRAKANRPFSSKDSPYNVKPSIHSNITNEKDTKFEETLTSDLKVDDDFAGPSTSTSSVNSSNEKFNPSESKTKNMDRDNSVQKTSKSMQPKEKAGSAGNRTSPEFLLTSKKSGRGDATNSVTSSPSKKGEEKDKSGGSSSSTIPSLKENIVLDAALLGAKRTLEIDDKISPPIAAEPPEFAIQQKGCEPRGIKDHKGCKKSPNAKQSD* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3033 694 MobiDBLite consensus disorder prediction 490 518 - -
Ahy17g3033 694 MobiDBLite consensus disorder prediction 535 554 - -
Ahy17g3033 694 MobiDBLite consensus disorder prediction 490 511 - -
Ahy17g3033 694 MobiDBLite consensus disorder prediction 530 635 - -
Ahy17g3033 694 MobiDBLite consensus disorder prediction 656 694 - -
Ahy17g3033 694 Gene3D - 306 359 IPR023408 -
Ahy17g3033 694 Gene3D - 201 305 - -
Ahy17g3033 694 MobiDBLite consensus disorder prediction 674 688 - -
Ahy17g3033 694 Pfam Mechanosensitive ion channel 248 457 IPR006685 GO:0016020|GO:0055085
Ahy17g3033 694 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 18 591 IPR045042 -
Ahy17g3033 694 MobiDBLite consensus disorder prediction 567 611 - -
Ahy17g3033 694 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 18 591 - -
Ahy17g3033 694 SUPERFAMILY Sm-like ribonucleoproteins 291 361 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3033 Ahy-Chr17 131302778 131310230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3033 24 654 Mechanosensitive Ion Channel Family AT1G58200 49.772 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3033 K22047 - gmx:100797302 821.231