Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3032 ATGCAGAACAACGACAACAACAAAGAAGAAGCTGAACGTCTGATAGGAATCGCAGAGAAGCTTCTACAGAACCGCGACCTCAACGGCGCCAAAGACTTCGCCATCCTCGCCCAAGAAACCGAGCCCCTTCTAGAAACTTCCGACCAGATCCTTGCCATCGCCGACGTCCTCCTCATCTCCGACGCCACCACCACCGATAACACCCCGCAGTGGTACCAAATACTCCAAGTCGACGTGTTACACTCTCAAGACCTCCACGTCATCAGGTCCAACTACCGCAGGCTCGCCCTCCTCCTCCACCCTGACAAGAACCGCTTCCCCTTCGCCCAGCATGCATTCGCCCTCGTTTCCGACGCCTGGTCCGTCTTATCGGACCCGGCCCAAAAACTCGCCTACGATGCGAGTCTGAACCGGGCCCAGGGGAATGTTTCCGGTTCGGTTCAGCAGGAGAAGCTTCCGGTTCGGAGGGGGAGCGATCCTTATTCGGGGAACTTCTGGACGGCGTGTCCGTACTGTTACTTGATGTATGAATACCCTAGGGTTTACGAGGGGTGTTGCTTGAGGTGCCAAAACGACAATTGCGAGAGGTCGTTTCACGGTGCTGCGGTTACTGCTATGCCGCCGTTGGTGCCTGGTGAGGAGAAGTATTATTGCAATTGGGGCTTCTTTCCGATGGGTTTTGTCTTTGAGAGCTTGAAATCCAATGGAAATGCTGCGCCGCAAACGGTGGCTTCCGATTGCATGCAGCAACCGGTGCCAGTTGCGGTGGCGCCTGCGGCGGTTGATGTTTCGGGTAGTGTGGGTTCGCGGAAGCGAGGGAGGCCCCGGAGGATGGTTTGA 840 0.5643 MQNNDNNKEEAERLIGIAEKLLQNRDLNGAKDFAILAQETEPLLETSDQILAIADVLLISDATTTDNTPQWYQILQVDVLHSQDLHVIRSNYRRLALLLHPDKNRFPFAQHAFALVSDAWSVLSDPAQKLAYDASLNRAQGNVSGSVQQEKLPVRRGSDPYSGNFWTACPYCYLMYEYPRVYEGCCLRCQNDNCERSFHGAAVTAMPPLVPGEEKYYCNWGFFPMGFVFESLKSNGNAAPQTVASDCMQQPVPVAVAPAAVDVSGSVGSRKRGRPRRMV* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3032 279 SUPERFAMILY Chaperone J-domain 62 137 IPR036869 -
Ahy17g3032 279 Pfam DnaJ domain 71 133 IPR001623 -
Ahy17g3032 279 Gene3D DnaJ domain 59 154 IPR036869 -
Ahy17g3032 279 SMART dnaj_3 69 128 IPR001623 -
Ahy17g3032 279 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Ahy17g3032 279 CDD DnaJ 71 125 IPR001623 -
Ahy17g3032 279 PRINTS DnaJ domain signature 92 107 IPR001623 -
Ahy17g3032 279 PRINTS DnaJ domain signature 108 128 IPR001623 -
Ahy17g3032 279 ProSiteProfiles dnaJ domain profile. 70 136 IPR001623 -
Ahy17g3032 279 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3032 Ahy-Chr17 131301023 131302201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3032 1 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 56.710 5.80e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3032 - - ahf:112706243 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3032 17 131301023 131302201 Ahy17g3032 17 131301023 131302201 ECH
Ahy17g3032 17 131301023 131302201 Ahy7g1734 7 64222402 64224096 hybridization
Ahy17g3032 17 131301023 131302201 Ahy17g1724 17 41133995 41135683 PCT