Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3017 ATGGCGTCCACGGTGCCGGAGAATCTAACCAGGGAACAATACGTGTACCTAGCCAAGCTAGCTGAGCAAGCAGAACGCTACGAAGAGATGGTCCAGTTCATGCAGAAGCTAGTCCTCTCTTCCACCCCTGCCGCCGAGCTCTCCGTCGAAGAGCGCAACCTCCTCTCCGTCGCATACAAGAACGTCATCGGCTCCCTGCGTGCCGCGTGGCGCATCGTTTCCTCAATCGAGCAGAAGGAGGAAGGTCGCAAGAACGACGACCACGTGCCTCTCGTCAGAGACTACAGATCCAAGGTGGAGACTGAGCTTTCCAACGTCTGCGCCAGCATCCTCTCGCTTCTCGACTCCAATCTCATCCCCTCCGCCTCCGCCGGCGAGTCCAAGGTCTTCTACCTCAAGATGAAAGGTGATTACCACCGTTACCTCGCTGAGTTCAAGACCGCCGATGAACGCAAAGCCGCCGCTGAGGACACCATGCTCTCTTACAAGGCCGCTCAGGACATTGCTTATGCGGATCTTCCACCTACTCATCCTATAAGATTGGGTCTGGCTCTCAACTACTCTGTTTTCTACTATGAAATCCTCAACCAGTCTGATAAAGCATGCGGCATGGCTAAACAGGCTTTTGAGGAAGCAATTGCTGAGCTGGATACCTTGGGAGAAGAATCCTACAAAGACAGCACGCTTATAATGCAGCTTTTAAGAGACAACCTTACCCTTTGGACTTCTGACGTCCAGGACCAGCTAGATGAGCCCTAA 759 0.5336 MASTVPENLTREQYVYLAKLAEQAERYEEMVQFMQKLVLSSTPAAELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVPLVRDYRSKVETELSNVCASILSLLDSNLIPSASAGESKVFYLKMKGDYHRYLAEFKTADERKAAAEDTMLSYKAAQDIAYADLPPTHPIRLGLALNYSVFYYEILNQSDKACGMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3017 252 Coils Coil 17 37 - -
Ahy17g3017 252 Pfam 14-3-3 protein 17 242 IPR023410 -
Ahy17g3017 252 Gene3D - 1 251 IPR036815 -
Ahy17g3017 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Ahy17g3017 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Ahy17g3017 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Ahy17g3017 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Ahy17g3017 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Ahy17g3017 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Ahy17g3017 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Ahy17g3017 252 SMART 1433_4 11 251 IPR023410 -
Ahy17g3017 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Ahy17g3017 252 PIRSF 14-3-3 6 251 IPR000308 -
Ahy17g3017 252 PANTHER 14-3-3 PROTEIN 8 248 IPR000308 -
Ahy17g3017 252 PANTHER BNAC02G00320D PROTEIN 8 248 - -
Ahy17g3017 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3017 Ahy-Chr17 130872232 130876066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3017 1 246 14-3-3 family AT5G10450 84.146 4.29e-154 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3017 K06630 - mnt:21384884 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3017 17 130872232 130876066 Ahy17g3017 17 130872232 130876066 ECH
Ahy17g3017 17 130872232 130876066 Ahy8g0720 8 14151902 14155309 hybridization