Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3014 ATGGGAGAAGATTGTGGAACCTGGTTACCGCGTATGCAATTTGGTTGGCAGTCACCCAATTTGGGTTCCTTTAGTGTTCCCCCTAATGCGTGGAAGCAAAATGGTATTTCTGCCACTGCCGTGAACTCTGGCATCAATGTCATAGCAAGGAATGAAACAATGCCAGCTTATGAGTCACCTTCAATGCCCAATTTGCCATTAGGATGTTCTAATGAACCCCATCCTTGGTTTTATTGTTTGCCTCGCTCTCGACAGGAGTTTACTCCTGCTCCAAACTTTGCTGCTGAGGAAAAATTCCTTGCCGATCGTGTAAAAGGTTTGAGGGGCAAATTTGCTCCTTATGGTGAATCAGGCTCCCCTCAGAAGCAATTCCTTGTTATTGATCAGACGGGTGGTCAAACAACTGTTGTTTATAGTTCTAAGTTTGGGAGTCCCAATGAGTGCCTTGCTTCTTGGCATTCAAAATTGCACGGCACAAACTATTTGAATGGGGAATACCCTTTGGGAAAAGAATTGAGCCATCCGAATGGGCCACTTGTGGATGATAAAGGGGATGAGAATCTGGGAACTGGTGTTGAAAGCGAGATGCATGAAGACACGGAAGAAATTAATGCATTGCTTTCCTCTGACAGTGATGGTTATTCTACGGGGAATGATGATGACGACGATGAAGTTACCAGCACAGGGCATTCTCCAAGTACAATGACCAATCTTTATAACCACGGAAAATTTGGAGGAATTGAAGAAGTTGCAAGCTCCACTGGGAGAACAAAGAAGAGGAAGCTATTAGATGGTTATCATGATGGCTTACAATTTATTGGTACTACCGATTCTTTGAAGTCGAAGAACAAATCCTTTGCAATGGAAGATGATGCCGAATCGAGATGTTCCAACTGCTACAATGGGAGATCTGAAGAAACGGATTCCTTGTCAGTTAACAAGAAGATGAGAAAGGAGAAATTACGAGAACTTTTGAATGTTCTTCAGAGCATGATTCCTGGTGGCACGGACAAGGACAGGGACCCGGCTATGCTCTTGGATGATGCCATACGCTGCTTGAAAGCCATGAAAGTTGAGGCTAAAGAGCTTGGACTCAAGTGA 1101 0.4405 MGEDCGTWLPRMQFGWQSPNLGSFSVPPNAWKQNGISATAVNSGINVIARNETMPAYESPSMPNLPLGCSNEPHPWFYCLPRSRQEFTPAPNFAAEEKFLADRVKGLRGKFAPYGESGSPQKQFLVIDQTGGQTTVVYSSKFGSPNECLASWHSKLHGTNYLNGEYPLGKELSHPNGPLVDDKGDENLGTGVESEMHEDTEEINALLSSDSDGYSTGNDDDDDEVTSTGHSPSTMTNLYNHGKFGGIEEVASSTGRTKKRKLLDGYHDGLQFIGTTDSLKSKNKSFAMEDDAESRCSNCYNGRSEETDSLSVNKKMRKEKLRELLNVLQSMIPGGTDKDRDPAMLLDDAIRCLKAMKVEAKELGLK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3014 366 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 305 356 IPR011598 GO:0046983
Ahy17g3014 366 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 313 362 IPR036638 GO:0046983
Ahy17g3014 366 MobiDBLite consensus disorder prediction 208 240 - -
Ahy17g3014 366 MobiDBLite consensus disorder prediction 176 195 - -
Ahy17g3014 366 PANTHER TRANSCRIPTION FACTOR BHLH145 1 365 - -
Ahy17g3014 366 MobiDBLite consensus disorder prediction 172 195 - -
Ahy17g3014 366 PANTHER TRANSCRIPTION FACTOR BHLH145 1 365 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3014 Ahy-Chr17 130736124 130741942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3014 76 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 31.488 4.52e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3014 - - gmx:102668102 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3014 17 130736124 130741942 Ahy17g3014 17 130736124 130741942 ECH
Ahy17g3014 17 130736124 130741942 Ahy7g1716 7 62864970 62868680 hybridization
Ahy17g3014 17 130736124 130741942 Ahy8g0714 8 13984153 13987298 hybridization
Ahy17g3014 17 130736124 130741942 Ahy17g3014 17 130736124 130741942 PCT
Ahy17g3014 17 130736124 130741942 Ahy8g0714 8 13984153 13987298 PCT
Ahy7g1716 7 62864970 62868680 Ahy17g3014 17 130736124 130741942 PCT
Ahy17g3014 17 130736124 130741942 Ahy7g1716 7 62864970 62868680 PCT
Ahy8g0714 8 13984153 13987298 Ahy17g3014 17 130736124 130741942 PCT