Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3003 ATGAGGAAGAAAAGGAAAGGAAGTGAGGCAGATGCCTCCGATCTGCCGGATGATGTTTTGCCTTTGGAACATGAGTCTGCGTCTTCGAATTTGAAGTGTCATTACTCGCTGGAGGATTGCTTTAGGCTGAAGAAGAGGTGCAAGGAAGATGCCGACACTGAGCCCGCCTCTTCTTATAAGAGGAGGCTTGCCGGCATTGCGACTGCCCCGCCTTGCGGGACTTCATCATTGATCACGCCGGGCAGAGGTCTCAAGAGGAAGATTGGTTGCATTGATGCTGCTACCCAGATGGGCAGGAAGAAGAAGATTGAGGATGATTATGTTCCTGGTCAAACGATTGGGCAAGGAAAATTTGGCTCTGTTTGGTTGTGCCGATCAAGGGCTAGCGGAGCAGAATATGCGTGTAAGACTCTGAAGAAAGGAGAGGAGACAGTTCATCGAGAGGTTGAGATAATGCAGCACTTGTCTGGACATTCCGGGGTTGTGACACTGCAAGCAGTGTATGAAGAAGCTGAATGCTTCCATCTTGTGATGGAATTATGCTCCGGGGGGCGACTGATTGATCATATGTTTAGGGAAGGTCCATGTTCGGAACAGCAGGCTGCTAATGTACTCAAGGAAGTGATGTTAGTCATCAAGTACTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCTGAGAATATTCTGCTCACAGCATCAGGAAAAATAAAGCTTGCAGATTTTGGCCTCGCAATGAGAATTTCTGAAGGTCAGAACTTGACTGGCTTAGCAGGAAGCCCTGCATATGTGGCCCCAGAAGTATTGTCAGGCAAATACTCTGAGAAGGTGGATATATGGAGTTCGGGAGTGCTCCTGTATGCTCTATTGGTTGGCAATCTTCCATTCCAGGGGGATTCATTGGAAGCTGTTTTTGAGGCAATTAAGAATGTTAAATTGGATTTCCAAACAGGCATATGGGCAGCAATATCTAAACCTGCACGGGACCTCGTCGAGAGAATGCTTACAAGGGATGTTACATCAAGAATAACAGCTGATGAAGTACTTACGCATCCATGGATGACATTTTACACAGAACGCACATTGAAGCCACTGCCCAGCCGAACAAAAACGAAGCACCAAGTTGGTGCATCATGCGGACGGTTTGTCTCCGCCCCGGTAACTAGGTTAGGAAGAAACAGGTTAGGTAACAGCTCCCTTAGCGAGTCTTCGTCCTCTGAGAGTTGCGACTCAGATGATGAGGACGGATGTGTGCTGATCGACGCTCTAGCCACGGCGATCTCACACGTAAGGATCTCAGAACCGAAGAGGAGCAGGTTGTGTGGTCCAACCGGTCCAATAGTTGAGCAAGGTTCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1398 0.4778 MRKKRKGSEADASDLPDDVLPLEHESASSNLKCHYSLEDCFRLKKRCKEDADTEPASSYKRRLAGIATAPPCGTSSLITPGRGLKRKIGCIDAATQMGRKKKIEDDYVPGQTIGQGKFGSVWLCRSRASGAEYACKTLKKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDHMFREGPCSEQQAANVLKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLSGKYSEKVDIWSSGVLLYALLVGNLPFQGDSLEAVFEAIKNVKLDFQTGIWAAISKPARDLVERMLTRDVTSRITADEVLTHPWMTFYTERTLKPLPSRTKTKHQVGASCGRFVSAPVTRLGRNRLGNSSLSESSSSESCDSDDEDGCVLIDALATAISHVRISEPKRSRLCGPTGPIVEQGSSNMKANNLCKAF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3003 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Ahy17g3003 465 MobiDBLite consensus disorder prediction 1 20 - -
Ahy17g3003 465 SMART serkin_6 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g3003 465 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Ahy17g3003 465 Gene3D Transferase(Phosphotransferase) domain 1 98 389 - -
Ahy17g3003 465 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 24 457 - -
Ahy17g3003 465 CDD STKc_CAMK 106 354 - -
Ahy17g3003 465 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 457 - -
Ahy17g3003 465 ProSiteProfiles Protein kinase domain profile. 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g3003 465 SUPERFAMILY Protein kinase-like (PK-like) 99 383 IPR011009 -
Ahy17g3003 465 Pfam Protein kinase domain 108 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3003 Ahy-Chr17 130579001 130582367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3003 107 368 EF-hand Containing Proteins AT1G50700 43.015 1.11e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ahy17g3003 Pkinase 1.30E-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3003 - - gmx:100812729 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3003 17 130579001 130582367 Ahy17g3003 17 130579001 130582367 ECH
Ahy17g3003 17 130579001 130582367 Ahy8g0702 8 13799151 13802520 hybridization
Ahy17g3003 17 130579001 130582367 Ahy17g3003 17 130579001 130582367 PCT
Ahy17g3003 17 130579001 130582367 Ahy8g0702 8 13799151 13802520 PCT
Ahy8g0702 8 13799151 13802520 Ahy17g3003 17 130579001 130582367 PCT