Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3001 ATGGAAGGAGATTCAGTGAAGTTACTAGGATTTTGGGGTAGTCCAGCTGTTCTAAGAGTGAAGTGGGCACTAGCAGTTAAAGGAATAGAATACCAATATGTGGAAGAAGATCTCAGCAACAAGAGTGACATGCTCCTTAAATACAACCCTGTCTACAAAAAGGTACCTGTTCTTGTGCACCAGGGTAAGCCCCTTGCTGAATCACTGCTCATTCTTGAGTATATTGATGAGACTTGGAAGCAAAATCCTCTTCTTCCACATTCTCCTTATGAAAGGGCCCAGGCTAGATTCTGGTCCAAATTCGTTGATGACAAGTGTATGCCAACGGTTGTGGCAGCGTTTTCCAAGGTAGGAGAAGAGCAACAGAAGGCAGCAGAAGAAGCTCGAGAGAATCTGAAGAGGCTTGAGGTTGGACTAGAGGGAAAACGCTTCTTTGGAGGTGATAACATTGGCTTTGTGGACATTGCTATTGGCTGGCTTCCATACTGGATTGGAATAGCTGAGGAAGTTGTGGCCATCAACCTTATTGATGCAGAGTCAATGCCTAAGCTTAACTCATGGTTCCATGCTTTTATTGACATTCCAATTATCAAAGAACTCTTGCCTCCTCGTCACAAATTGCTCCCTCACACCAAGGCATTCCTTCAAGCGTAG 654 0.445 MEGDSVKLLGFWGSPAVLRVKWALAVKGIEYQYVEEDLSNKSDMLLKYNPVYKKVPVLVHQGKPLAESLLILEYIDETWKQNPLLPHSPYERAQARFWSKFVDDKCMPTVVAAFSKVGEEQQKAAEEARENLKRLEVGLEGKRFFGGDNIGFVDIAIGWLPYWIGIAEEVVAINLIDAESMPKLNSWFHAFIDIPIIKELLPPRHKLLPHTKAFLQA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3001 217 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Ahy17g3001 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 213 IPR045073 -
Ahy17g3001 217 Coils Coil 118 138 - -
Ahy17g3001 217 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Ahy17g3001 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Ahy17g3001 217 Gene3D Glutaredoxin 1 84 - -
Ahy17g3001 217 SFLD Glutathione Transferase (cytosolic) 2 213 IPR040079 -
Ahy17g3001 217 SFLD Main.3: Omega- and Tau-like 2 213 IPR045073 -
Ahy17g3001 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 213 IPR010987 -
Ahy17g3001 217 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Ahy17g3001 217 CDD GST_N_Tau 6 79 - -
Ahy17g3001 217 Pfam Glutathione S-transferase, C-terminal domain 110 194 IPR004046 -
Ahy17g3001 217 PANTHER GLUTATHIONE S-TRANSFERASE ISOFORM X1-RELATED 1 213 - -
Ahy17g3001 217 Gene3D - 85 217 - -
Ahy17g3001 217 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3001 Ahy-Chr17 130570871 130572061 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3001 4 217 Glutathione S-transferase Gene Family AT3G09270 50.926 5.45e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3001 K00799 - gmx:100813267 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3001 17 130570871 130572061 Ahy17g3001 17 130570871 130572061 ECH
Ahy17g3001 17 130570871 130572061 Ahy8g0700 8 13790756 13791635 hybridization