Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2977 ATGGCATGCAATAGCAGTGAAAATATTGGCAAACCAATCAGATGCAAAGCTGCAATATGCAGAAAAGCAGGTGAACCTCTTGTTATAGAGGAAATTGAGGTTGACCCACCAAAAGCTTGGGAGGTTCGGATCAAGATTCTACTCACTTCTCTGTGTCACACTGATGTAACCATCTGGAAAATAGACAACGTCAGTGCAGCAAAATTTCCAAGAATTTTCGGTCATGAAGCCGTAGGTTGTGGAGAGCGTGGGGAACACGTGAAAGAAATGAAAGAAGGAGACAGAGTAGTCCCTGTGTTCCTCGCGAACTGCGAGGAATGCAGGGACTGCAAGAGTTCTAAGAGCAACGAGTGCTCCAAATTCAGGAAGGAGCTTTTCAGTGTAATGCCGAGAGATGGAACGAGCAGATTCAGGGATATGAATGGAGAAACGGTGCACCATACCTTGTGTGTTTCGAGCTTCTCAGAGTACACAGTTGTGGATGTGGCTCATTTGGTCAACATTAGCCATTATCACCTTCCTCCTCACGAGGCTTGCTTGCTCAGTTGCGGTGTTTCAACAGGGTTGGGAGCGGCATGGAAAGTGGCCGACGTGGAAGAAGGGTCGACAGTGGCTATTTTTGGGCTAGGAGCTGTAGGCCTTGCGGTTGCTGTAGGAGCAAAGCAACGAGGAGCAACAAAGATCATAGGCGTGGATATTAATCATGAAAAATTTGAAATAGGAAAAAGATTTGGAATTACTGATTTTGTGAATCCCTCCACTTGTGAAGACAAGTCAGTGAGCGAGGTGATTAACGAAATGACAGATGGAGGTGCTGATTACTGCTTCGAGTGCATAGGGTTGGCTTCACTGATGGCAGAGGCTTTTAACAGTAGCCGGAATGGTTGGGGGAAAACCGTGATATTAGGGGTGGAAATGCATGGTTCGCAAGTGACATTGAATCCTTATCTGTTGTCGAGCGGCAGAACAATCACAGGATCAATGTTTGGAGGTCTCAAACCCAAATCTGATATCCCCCTCCTTGCTAACAAGTACTTGGACAGAGAATTTAGCTTGGAGGGATTCATAACGCACGAGGTGGCCTTCAAGGACATTAACAAAGCTTTTGACTATCTCCACCAAGGAAAGAGCCTCCGCTGCATTATAAAGATGGATCCTTAA 1161 0.4599 MACNSSENIGKPIRCKAAICRKAGEPLVIEEIEVDPPKAWEVRIKILLTSLCHTDVTIWKIDNVSAAKFPRIFGHEAVGCGERGEHVKEMKEGDRVVPVFLANCEECRDCKSSKSNECSKFRKELFSVMPRDGTSRFRDMNGETVHHTLCVSSFSEYTVVDVAHLVNISHYHLPPHEACLLSCGVSTGLGAAWKVADVEEGSTVAIFGLGAVGLAVAVGAKQRGATKIIGVDINHEKFEIGKRFGITDFVNPSTCEDKSVSEVINEMTDGGADYCFECIGLASLMAEAFNSSRNGWGKTVILGVEMHGSQVTLNPYLLSSGRTITGSMFGGLKPKSDIPLLANKYLDREFSLEGFITHEVAFKDINKAFDYLHQGKSLRCIIKMDP* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2977 386 SUPERFAMILY GroES-like 335 382 IPR011032 -
Ahy17g2977 386 Pfam Zinc-binding dehydrogenase 211 334 IPR013149 -
Ahy17g2977 386 Gene3D - 18 379 - -
Ahy17g2977 386 SUPERFAMILY GroES-like 9 194 IPR011032 -
Ahy17g2977 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 347 IPR036291 -
Ahy17g2977 386 Gene3D - 188 327 - -
Ahy17g2977 386 PANTHER ALCOHOL DEHYDROGENASE 7 383 - -
Ahy17g2977 386 Pfam Alcohol dehydrogenase GroES-like domain 41 167 IPR013154 -
Ahy17g2977 386 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 7 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2977 Ahy-Chr17 130162126 130167767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2977 41 372 Monolignol Biosynthesis Gene Families AT2G21890 25.882 3.98e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2977 K00121 - qsu:112023922 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2977 17 130162126 130167767 Ahy17g2977 17 130162126 130167767 ECH