Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2919 ATGTCTTCGTCTTCGGCGGCTGCCGCAAACAATTCGCCGTGTGCGGCGTGCAAGATTCAGCGTCGGAAGTGCACACAGGAGTGCGTGTTCGCGCCATACTTCCCGCCGGACAACCCGCAGAGATTTGCGTACGTTCATAAGGTGTTCGGAGCAAGCAACGTGGCAAAACTCCTCAACGACCTGAACGCAGCTCAACGAGAGGATGCAGTGAAGTCGCTGGCATACGAGGCCGAGGCACGTCTCCGTGACCCCGTGTACGGTTGCGTAGGACTCATTTCACTTCTCCAGCACAAGCTCAAACAACTCCAGGCTGAACTTAACCATGCTAAGACGGAACTCGCAAACTACGTTGTCGTTAACAATAATAATAACGGTTCACCTCACGCGCCTGTTCTCCCGCTCTTTAACAACCAACACCATCAGCAACCTTCTCAACTGAATCGTAACAACCTCTCACATCACTCTCTGCAACCATTTTCTGTTTCTGTTTCCCCTTTTCAGGAGGTTGTTATGCAGCACCAGCAAGAGATTTTGGGGTTTGAGAATTATATGACGGTTGGTTCTTCTTCCGCTGCTTCTGCTGTCTCACCTTCGCTGGCTCTTGGACCGGTTGATCACAGTTTTCATCACCATCATCATAATCATCACCATAATCTGCAGCAGCAGATTCAGGCGCATCATCAATCTTTTATGTTTCAGAAGCAGGCAAAGTTCGAAGGCGAGGAGGGTAGGAATAGCAGAAGGACCGGTCCTTGTTGCTGA 762 0.5039 MSSSSAAAANNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNDLNAAQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLKQLQAELNHAKTELANYVVVNNNNNGSPHAPVLPLFNNQHHQQPSQLNRNNLSHHSLQPFSVSVSPFQEVVMQHQQEILGFENYMTVGSSSAASAVSPSLALGPVDHSFHHHHHNHHHNLQQQIQAHHQSFMFQKQAKFEGEEGRNSRRTGPCC* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2919 253 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 233 - -
Ahy17g2919 253 Coils Coil 92 119 - -
Ahy17g2919 253 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Ahy17g2919 253 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Ahy17g2919 253 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 10 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2919 Ahy-Chr17 128900350 128902789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2919 8 117 AS2 family AT5G66870 78.182 1.43e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy17g2919 LOB 2.20E-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2919 - - adu:107460830 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2919 17 128900350 128902789 Ahy8g0626 8 12253847 12256286 hybridization