Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2905 ATGGACATATTTGACACATTCCCACAAGTTAGCATGTGGGGTGACAACTTTAAGGTTGATGGTGGCCTCATAAATTCAATCACTTCTCCAATGTTGTTGCCTGAATATGTTCCACATGAATTGAGGGAACAATCTAGACAAAATCAAGAGGCTACCAATAAAGATGTTAGTAAGGTACTAAGACGGCTAGCGCAGAATCGAGAGGCTGCTCGGAAGAGCCGACTGCGAAAAAAGGCTTATGTTCAACAATTAGAAACAAGCCGTTTGAAGCTCATGCAATTGGAGGAGGAGATTGTTAAAGCTAAAAAGCAGAGTATGTATATTGGAAACAATCCATTGGATGCTAGTTATATGGGATCTTCTGGATCATTAAACTCAGCAGGGATTGTTTTGTTTGAAATTGAATATGGAAATTGGATTGAAGAGCAACACAAACTGAATGAAGAACTCAGAAATGCATTCCAAACTCAAGCACCTGATGAACAACTTAATCAACTTATTCAGACTCTGTTGAATCATTACTCAAATCTTTTCAAGATGAAATCAGATGCTGCAAAGGCTGATATATTCTACCTAATCAGTGGTGTCTGGAAATCATCCGCGGAGCGCCTTTTCCTTTGGATTGGAGGATCTCGCCCTTCGCAGCTTCTAAGTATCATTGTGCCACAGCTTGAACCTTTAACTGAACAACAAACTGCTAGCATTAGCAGACTCCGGCTATCGTCGCAACAAGCTGAAGATGCTCTCTCACAAGGACTAGATAAACTCCAGCAGAGTCTTGTCCACAACATTGCAGTTGATCCATTGGTAGCAGGAAACTTTGGGTTTCAGATGGCTGATTCCATTGAGAAAATTGAGGGACTTGAAGGCTTCCTTAACCAGGCAGATCATCTTAGGCAACAGACATTGATACACATGTCAAGGATCCTAACAACACATCAAGCTGCTCAAGGATTGCTGGCTTTGGGGCAATACTTGCAAAGACTTCGTTCTCTCAGTTCTCTTTGGGCTTCTCGTCCATCTCAACCTCTCTAG 1035 0.4184 MDIFDTFPQVSMWGDNFKVDGGLINSITSPMLLPEYVPHELREQSRQNQEATNKDVSKVLRRLAQNREAARKSRLRKKAYVQQLETSRLKLMQLEEEIVKAKKQSMYIGNNPLDASYMGSSGSLNSAGIVLFEIEYGNWIEEQHKLNEELRNAFQTQAPDEQLNQLIQTLLNHYSNLFKMKSDAAKADIFYLISGVWKSSAERLFLWIGGSRPSQLLSIIVPQLEPLTEQQTASISRLRLSSQQAEDALSQGLDKLQQSLVHNIAVDPLVAGNFGFQMADSIEKIEGLEGFLNQADHLRQQTLIHMSRILTTHQAAQGLLALGQYLQRLRSLSSLWASRPSQPL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2905 344 SMART brlzneu 54 114 IPR004827 GO:0003700|GO:0006355
Ahy17g2905 344 Pfam Seed dormancy control 148 221 IPR025422 GO:0006351|GO:0043565
Ahy17g2905 344 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 61 76 IPR004827 GO:0003700|GO:0006355
Ahy17g2905 344 ProSiteProfiles DOG1 domain profile. 129 339 IPR025422 GO:0006351|GO:0043565
Ahy17g2905 344 Gene3D - 57 108 - -
Ahy17g2905 344 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 341 - -
Ahy17g2905 344 Coils Coil 77 104 - -
Ahy17g2905 344 PANTHER TRANSCRIPTION FACTOR TGA9 1 341 - -
Ahy17g2905 344 SUPERFAMILY Leucine zipper domain 58 94 IPR046347 GO:0003700|GO:0006355
Ahy17g2905 344 Pfam bZIP transcription factor 58 91 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2905 Ahy-Chr17 128647332 128650262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2905 1 343 Calmodulin-binding Proteins AT1G77920 51.648 2.75e-121 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy17g2905 DOG1 7.70E-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2905 K14431 - gmx:100794268 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2905 17 128647332 128650262 Ahy17g2905 17 128647332 128650262 ECH
Ahy17g2905 17 128647332 128650262 Ahy8g0618 8 12029709 12032506 hybridization
Ahy17g2905 17 128647332 128650262 Ahy17g2905 17 128647332 128650262 PCT
Ahy17g2905 17 128647332 128650262 Ahy8g0618 8 12029709 12032506 PCT
Ahy8g0618 8 12029709 12032506 Ahy17g2905 17 128647332 128650262 PCT