Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2904 ATGTTAAACAGAGATTCGTTGTCATTGAGGGCCATCACGTATTCTCTTCCTTACACTTCCACGACCCTCCCCCGAAAAAAAAAGGGAATTTTGCAACTTGGGTGGTTCGGGTTTCTGCGTTGCATCGTTGCGTTGATTTTCAGACACCAGTTTCAAACCAGGGCTTCTTCTTTTCGGAACCCTAATTGCAATTCCCGTTTTCCCTCTTTCTCGTTATACTCTTCCTGGCTCATCGATTCCTGGGGTTCTAGCAGGACTGGACTATGGTTTCGCGTTAATCAGAGGAGAACTCTGGCCAAGGCTTCAAATTGGGACGAACAACGATCCCCGTATGAAACCCTTGAATTGGACAGAGATGCTGATGAAGAACAGATAAAGAGCGCTTATCGACGATTGGCTAAATTCTATCATCCAGATGTCTATGATGGTAGAGGATCCCTTGAGGAAGGTGAAACAGCAGAAGCTAGGTTCATTAAGATCCAAGCTGCTTATGAATTGCTTATAGACGATGAGAAACGAAGACAGTATGATATGGATAACCGAGTCAACCCTATGAAGGCGTCTGAGGCATGGATGGAGTGGCTAATGAAAAAGCGAAAAGCTTTTGCTCAACGTGGTGATATGGCAGTTGCTGCTTGGGCTGAGCAGCAACAGCGACAGTTGAATCTACGTGTCCGTCAACTTTCTCGTTCAAAGATGGATCCTGATGAGGCAAGGAAGATTCTAGCTAGAGAGAAGGCAGCTGCTGCTAAGAATTTCTCCAATACCCTTAAAAGGCACACACTTGTTCTCAAGAAAAGAGATTTGATGAGAAGAAAGGCTGAGCAAGATCAAGATAAACTTATCAGCCAGCTCTTGGCAGCAGAAGGTCTTGAATCAGATACTGATGAATGA 894 0.4474 MLNRDSLSLRAITYSLPYTSTTLPRKKKGILQLGWFGFLRCIVALIFRHQFQTRASSFRNPNCNSRFPSFSLYSSWLIDSWGSSRTGLWFRVNQRRTLAKASNWDEQRSPYETLELDRDADEEQIKSAYRRLAKFYHPDVYDGRGSLEEGETAEARFIKIQAAYELLIDDEKRRQYDMDNRVNPMKASEAWMEWLMKKRKAFAQRGDMAVAAWAEQQQRQLNLRVRQLSRSKMDPDEARKILAREKAAAAKNFSNTLKRHTLVLKKRDLMRRKAEQDQDKLISQLLAAEGLESDTDE* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2904 297 PANTHER CO-CHAPERONE PROTEIN DJLA 90 296 - -
Ahy17g2904 297 ProSitePatterns Nt-dnaJ domain signature. 157 176 IPR018253 -
Ahy17g2904 297 ProSiteProfiles dnaJ domain profile. 109 180 IPR001623 -
Ahy17g2904 297 SUPERFAMILY Chaperone J-domain 62 176 IPR036869 -
Ahy17g2904 297 CDD DnaJ 110 169 IPR001623 -
Ahy17g2904 297 Gene3D DnaJ domain 94 198 IPR036869 -
Ahy17g2904 297 PRINTS DnaJ domain signature 152 172 IPR001623 -
Ahy17g2904 297 PRINTS DnaJ domain signature 111 129 IPR001623 -
Ahy17g2904 297 PRINTS DnaJ domain signature 129 144 IPR001623 -
Ahy17g2904 297 Pfam DnaJ domain 110 177 IPR001623 -
Ahy17g2904 297 PANTHER LD30543P 90 296 - -
Ahy17g2904 297 Coils Coil 111 131 - -
Ahy17g2904 297 SMART dnaj_3 108 172 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2904 Ahy-Chr17 128644105 128646637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2904 101 177 C2H2 Transcription Factor Family AT1G74250 38.961 1.42e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2904 - - ahf:112766429 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2904 17 128644105 128646637 Ahy8g0617 8 12026260 12028844 hybridization