Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2885 ATGCATCATCTACCTCCATTTTTTAATTCCAGTAATAGAAATCAACGCAGCAACAACAATTCCATGGATTCAAAGAAGCTCCGAAGGAAGCCCAAGCTCGAGCGCCGCAATGCCGTCAAGTACGTTGACTACGACGCCGACGGCTCCACCACCTCCTCACACGATGATTCCTCTTCTTCCGTCGGTGGCGGAAGCAGAAGCGATTCCATTTACACCCGATCCATGGATTTCTACGACCGAACTAGCTTCCGAATTGAGGGAACCGAGGGCGAGTTTGACCGGATTTGCCGGAGCTTGGGGCTCTCCGGCCCGGAGGACTTCGCCATACCGGCGGCGGCCTGGGAAGCCATGAAGGTCCGGTCGTCATCGGATATTCTCCCGAGGCTGAATCCGAGGGAAGAGCAAGTGCCACCGCGGCGGAGCGACGTCGTTGCGGTGGGTGAATTGGCCGAGGAATTCGAAGGTGGAGCTAGGGTTAGGGTTGATGAGACCAGTGGTTGCTGCGCGGAGAGCTCCAGTGGTGTATGCGGAGGAATCAAAGGGGTTCGTCCGCCGATGCTTAGGCCGCCGCCGGGGACCAAGGTGCCTGTGGTGGACAACACAAGCTCCACTTGGGACCTTCTAAGGGACTTTGCTCCAGAAGGTGCAGACAATGGCCACTTACTACAGATAGAACCAGATAAAGAAGACGAAGAAGAAGAAAAGCAAGTAGTAGTGGTGGAGGAAGGACGAGGTAAGAGAGAAGAGGAGGTGGAAGAAAGGGTGGATAATGCGGCGAGGATTGCGGAGATTGTTGCTGATCTTTCGGGGTCGTGTGGTTTTAGCACTTCAAATGAAGAAGATGATACTTCAAGCACTACCACAGGTCCAAGGTCTAACAATATATCTCCCAATGGAAGAATCAAGCGTATTATTACCTCTGGCGATTGGCAAAAGGGTGAGCTTCTTGGACGGGGTTCCTTTGGCTCAGTCTATGAAGGAATTTCTGGAGATGGATTCTTTTTTGCTGTGAAAGAGGTTTCACTGCTTGATCAAGATAATCAGGGAAAGCAAAGTATCTATCAACTGGAGCAGGAGATAGCACTTTTGAGTCAGTTTGAACATGAGAACATAGTTCAATACTATGGCACAGAAACGGATGAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCTCTTGCAAGCCTTTATCACAGGTATACTCTTCGAGATTCCCAAGTCTCTGCCTACACAAGACAGATTCTGCATGGCTTGAAGTATCTTCACGATCGAAATGTGCTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTAAAGCTTGCTGATTTTGGATTGGCAAAGGCAACCAAATTGAACGACATTAAATCATGCAGGGGGACACCCTTGTGGATGGCTCCTGAGGTTGTGAAAGGAAAGAACCAAGGTTATGGGCTTCCAGCTGATATGTGGAGTTTGGGATGCACTGTACTAGAAATGTTAACAGGCAAACTTCCATATTCGGAGTTTGAAAGCATGCAGGCATTATATAGAATTGGGAAAGGTGAGCGTCCTTCTATGCCTGATTCTCTTTCAAAGGATGCTCGAGACTTTATCCTGCAGTGCCTTCAAGTTAATCCAGATCACCGTCCCACTGCTGCCCAACTCTTAAGCCATCCATTTATCCAAAGACCAGTTTCCCACTCGTCGGGCTCATTTCCTAATCTTCCAGGCAAAAAAGGTTAA 1749 0.4837 MHHLPPFFNSSNRNQRSNNNSMDSKKLRRKPKLERRNAVKYVDYDADGSTTSSHDDSSSSVGGGSRSDSIYTRSMDFYDRTSFRIEGTEGEFDRICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLNPREEQVPPRRSDVVAVGELAEEFEGGARVRVDETSGCCAESSSGVCGGIKGVRPPMLRPPPGTKVPVVDNTSSTWDLLRDFAPEGADNGHLLQIEPDKEDEEEEKQVVVVEEGRGKREEEVEERVDNAARIAEIVADLSGSCGFSTSNEEDDTSSTTTGPRSNNISPNGRIKRIITSGDWQKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDQDNQGKQSIYQLEQEIALLSQFEHENIVQYYGTETDESKLYIFLELVTKGSLASLYHRYTLRDSQVSAYTRQILHGLKYLHDRNVLHRDIKCANILVDANGSVKLADFGLAKATKLNDIKSCRGTPLWMAPEVVKGKNQGYGLPADMWSLGCTVLEMLTGKLPYSEFESMQALYRIGKGERPSMPDSLSKDARDFILQCLQVNPDHRPTAAQLLSHPFIQRPVSHSSGSFPNLPGKKG* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2885 582 MobiDBLite consensus disorder prediction 1 67 - -
Ahy17g2885 582 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 78 576 - -
Ahy17g2885 582 ProSiteProfiles Protein kinase domain profile. 310 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2885 582 MobiDBLite consensus disorder prediction 46 67 - -
Ahy17g2885 582 MobiDBLite consensus disorder prediction 7 21 - -
Ahy17g2885 582 Pfam Protein kinase domain 311 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2885 582 SMART serkin_6 310 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2885 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Ahy17g2885 582 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 78 576 - -
Ahy17g2885 582 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Ahy17g2885 582 Gene3D Transferase(Phosphotransferase) domain 1 307 574 - -
Ahy17g2885 582 MobiDBLite consensus disorder prediction 272 298 - -
Ahy17g2885 582 SUPERFAMILY Protein kinase-like (PK-like) 308 566 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2885 Ahy-Chr17 128304750 128310266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2885 13 567 MAP Kinase Kinase Kinase AT4G08500 47.712 1.14e-163 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy17g2885 Pkinase 3.00E-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2885 K13414 - gmx:100819999 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2885 17 128304750 128310266 Ahy17g2885 17 128304750 128310266 ECH
Ahy17g2885 17 128304750 128310266 Ahy8g0602 8 11784251 11790059 hybridization
Ahy17g2885 17 128304750 128310266 Ahy17g2885 17 128304750 128310266 PCT
Ahy17g2885 17 128304750 128310266 Ahy8g0602 8 11784251 11790059 PCT
Ahy8g0602 8 11784251 11790059 Ahy17g2885 17 128304750 128310266 PCT