Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2863 ATGGAAATAGACATGATTGACATCCATAACCTTGAATTCTCCGGCTACAGTACCACCACCACAACCACCACTCCCTCTTCCGACGAAGACCCTGCCTACACCAACTGGACCCACTGGTCCCCCCTCGTCAATTGGGAAGCCATTGCCGCCCCTCATGATGACTTCCACCACCTCATCGACTCAATCATCGACCATCACCATGCCACCACCCCCCTCCACCTCACGCCCGACGACGATGACGAAGACGACACAACCACCGCCAACACAGTCGAAGATGAATCGCCACCACTTCCAACAACACCAACCCCTACCATCGCCGGCGAAAATGAAACAAAAGGCCTGAGGCTAGTGCACCTCCTCATGGCCGCAGCAGAAGCCCTCACTGGCACCACCAAGAGCCGTGACCTGGCTCGAGTGATATTGCTTCGACTCAAAGAGTTGGTTCCTTTCAGCAACACCAGCAGCAGCACAGGGGCCACCAACATGGAAAGACTCGCGGCGCATTTTACCCAGGCACTCCAAGGTTTGCTAGATGGCGCAGGGGGTGGTGGCGCACACAATAATCACAGTAACAATAACAAACAATATAGTTACGGGTCCCACCAAACGGAAACTCTAACAGCATTCCAACTGCTTCAAGACATGTCTCCTTACGTCAAGTTCGCCCACTTCACCGCCAATCAGGCCATTCTTGAAGCCATCGCACACCACAGACGGGCCCACATCGTCGATTTCGACATCATGGAAGGTATCCAGTGGGCCTCACTCTTGCAGGCCCTGGCCTCTCATAACAAAACAGCCTCACCTGGCCCACACCTCCGCATCACTGCATTGTCCAGAACCGGCTCAGGCCGGAGATCCATTGCCACCGTACAGGAAACAGGCCGGAGGCTCACCGCCTTCGCCGCTTCCCTAGGGCAGCCCTTTTCCTTTCACCACTGCAGGATGGACCCCGACGAAACGTTTCGGCCCAACGGGCTGAAACTCGTTCGCGGAGAGGCTTTGGTGTTCAATTGCATGCTCAACCTCCCGCATTTGCCTTACAGAGCGCGCGATTCGGTTGCGTCATTCTTGAACGGCGCGAAGGATTTGAGTCCTGTGCTGGTGACGATGGCAGAAGAGGACGTTGGGCCGGTAGGAGTGGATGCTGGATTTGTGGGCCGATTCATGGACTCACTGCACCACTACTCGGCGTTTTATGATTCGCTTGAAGCCGGGTTCCCAATGGAGGGTCGGGCCCGGGCTTTGGTTGAACGGGTATTTCTTGGACCGAGAATAGCAGCGTCGTTGGGGAGGATATACCGAACAAGTGAGGGGAAGGAAGAAAGAGGGTCGTGGAGGGAATGGTTGTGTGGTATGGGGTTTAAGGGAGTACCTTTAAGCTCAGCCAATCAGAGCCAAGCGAAACTTCTAATAAATTTGTTCAAGGACGGTTACAAATTGGAACAGTTAGGTCCCAATCAGTTAGTGTTGAGTTGGGAATCACGCCGTTTGTTTTCTGCATCTGTTTGGTCTTCTTCTTCCTCCCACTCTCAGATTGAACAATTGTAG 1551 0.5384 MEIDMIDIHNLEFSGYSTTTTTTTPSSDEDPAYTNWTHWSPLVNWEAIAAPHDDFHHLIDSIIDHHHATTPLHLTPDDDDEDDTTTANTVEDESPPLPTTPTPTIAGENETKGLRLVHLLMAAAEALTGTTKSRDLARVILLRLKELVPFSNTSSSTGATNMERLAAHFTQALQGLLDGAGGGGAHNNHSNNNKQYSYGSHQTETLTAFQLLQDMSPYVKFAHFTANQAILEAIAHHRRAHIVDFDIMEGIQWASLLQALASHNKTASPGPHLRITALSRTGSGRRSIATVQETGRRLTAFAASLGQPFSFHHCRMDPDETFRPNGLKLVRGEALVFNCMLNLPHLPYRARDSVASFLNGAKDLSPVLVTMAEEDVGPVGVDAGFVGRFMDSLHHYSAFYDSLEAGFPMEGRARALVERVFLGPRIAASLGRIYRTSEGKEERGSWREWLCGMGFKGVPLSSANQSQAKLLINLFKDGYKLEQLGPNQLVLSWESRRLFSASVWSSSSSHSQIEQL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2863 516 Pfam GRAS domain family 116 504 IPR005202 -
Ahy17g2863 516 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 506 IPR005202 -
Ahy17g2863 516 ProSiteProfiles GRAS family profile. 107 505 IPR005202 -
Ahy17g2863 516 MobiDBLite consensus disorder prediction 70 108 - -
Ahy17g2863 516 PANTHER SCARECROW-LIKE PROTEIN 26 4 506 IPR030028 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2863 Ahy-Chr17 127867604 127869379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2863 145 508 GRAS Transcription Factor Family AT3G54220 35.405 3.35e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy17g2863 GRAS 2.80E-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2863 - - aip:107608402 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2863 17 127867604 127869379 Ahy17g2863 17 127867604 127869379 ECH
Ahy17g2863 17 127867604 127869379 Ahy8g0575 8 11277878 11279715 hybridization