Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2857 ATGGTTAAGGCAGAAGAGAAGATCCAAAGAGAGACACCAATGAAGAATAATAAGCAGAAGAAGTACAAGGGAGTGAGAATGAGGAGTTGGGGATCATGGGTTTCAGAGATTAGAGCACCAAATCAGAAAACAAGAATATGGTTAGGTTCATATTCAACTGCAGAAGCTGCTGCTAGAGCCTATGATGCTGCACTTCTCTGTCTTAAAGGCTCTTCTGCAAATCTCAATTTCCCATTAACTTCTTCTAGTTACATTAACATCATCCCTCATCAAGATTCTTCTTCTTCTTCTTCTTCATCTGCTACTATGTCTCCAAAATCAATTCAAAGAGTTGCTGCTGCTGCTGCTGCTAATTGCACCTTTGTTGATGACATCAGCAACAATGCTAATGCTACAACACCTTCATCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCATTGGTGTCATCACCATCAATGGTTTCATCTCCCTCTGAACAAACTACTGATGATGATGTTGTAGATGCAGCATCACTCATCATGTCTTCAACTACTACTAGCTGTGATGAATCCATGGCTATGATGGAAGAGCCTTGGTACAACACCTTTGATGATGCTCTTGATCAGATGCTGAGTGGTTTCTTTGACCTTGATTCATCTCAGCTTCTTGGTAATCTTTATGAAGAAGAAAGTGACATTCGTTTGTGGAGTTTCTGTTAG 702 0.3989 MVKAEEKIQRETPMKNNKQKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPLTSSSYINIIPHQDSSSSSSSSATMSPKSIQRVAAAAAANCTFVDDISNNANATTPSSSSSSSSSSSSSLVSSPSMVSSPSEQTTDDDVVDAASLIMSSTTTSCDESMAMMEEPWYNTFDDALDQMLSGFFDLDSSQLLGNLYEEESDIRLWSFC* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2857 233 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Ahy17g2857 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 12 233 - -
Ahy17g2857 233 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Ahy17g2857 233 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Ahy17g2857 233 MobiDBLite consensus disorder prediction 1 21 - -
Ahy17g2857 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 233 - -
Ahy17g2857 233 MobiDBLite consensus disorder prediction 130 165 - -
Ahy17g2857 233 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Ahy17g2857 233 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Ahy17g2857 233 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Ahy17g2857 233 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Ahy17g2857 233 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Ahy17g2857 233 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2857 Ahy-Chr17 127804893 127805971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2857 22 232 AP2-EREBP Transcription Factor Family AT1G21910 46.919 8.58e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy17g2857 AP2 4.80E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2857 - - gmx:100813313 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2857 17 127804893 127805971 Ahy17g2857 17 127804893 127805971 ECH
Ahy17g2857 17 127804893 127805971 Ahy8g0569 8 11211640 11212703 hybridization