Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2848 ATGGGAGAAACATTAGTGATGAGCAAGGCAAAGCCTTATTTGCTAACTGTGGGGCTTCAGTTTGGGTTGGCAGGAACCTACATATTCTCCATGGCCAGTCTCAACCATGGAATGAGTCGTTATGTCTTTGTTGTTTATCGCAATCTCATTGCTGCTATTTCCCTCGCTCCCTTTGCATTCTTTTTTGAAAGGAAGGTTAGGCCAAAGATGACACTCTCTGTCTTTATTCGAATATTGGTTCTCGGGCTTCTGGAGCCAGTGATAGACCAAGGATTCACATTCTTAGGGATGCAATATACATCAGCTTCATTTGCATCTGCCATTATGAATGCTGTCCCATCCGTTACCTTTGTCCTAGCAGTCATTTTCAGAATAGAGCGAGTAAACGTGAAAGAGGTGCGAAGCCTAGCAAAGGTGATTGGGACATTGGTAACGTTTTGTGGCGCATTGGTGATGATACTCTACAAAGGCCCTATTATGAACCTTTTTGGTTCTTCACACGCAATCCATGATGATAATCATCACCACCATGATTCAACTCACTCCACTCAGAGCCTCTCTCATTGGGTCTCTGGAACTCTCTTTCTTTTTCTCGGTTGTGTCGCTTGGTCATCCTTCTACGTGTTACAGTCTGTAACGTTGAAAAGTTACCCGGCCGAGATGTCATTGTCCTCCTTGATATGCTTGGCGGGTGCTTCGCAAGCTTCCGTCGTCGCTGCGGTGGCCGAGCATCACTCCGGCGCTCGCCCTTGGATCGTTGGTTGGGACTTCAGGCTTTATGGTCCTCTTTACTCGGGTATAGTTAGCTCAGCCATTGCGTATTACGCGCAAGGGTTGGTGTTACAAAGCAAAGGGCCAGTGTTTTTAACGGCATTTAATCCCCTTTGCATGATCATTGTTTCCGTCTTGGGCTATTTTCTTCTCTCTGAGACTCTTCACTTGGGCAGTATCATAGGAGCAATTATTATAGCAGTGGGTCTTTACTCTGTGGTGTGGGGTAAAGGAAAAGACAGTTCTGACCCCACTATGACGCCGACCACAACAACAACAAAGCAAACAGAGTTGCAACAAAAACAACTCCCAATTACATCATCCGATATCTAA 1104 0.4565 MGETLVMSKAKPYLLTVGLQFGLAGTYIFSMASLNHGMSRYVFVVYRNLIAAISLAPFAFFFERKVRPKMTLSVFIRILVLGLLEPVIDQGFTFLGMQYTSASFASAIMNAVPSVTFVLAVIFRIERVNVKEVRSLAKVIGTLVTFCGALVMILYKGPIMNLFGSSHAIHDDNHHHHDSTHSTQSLSHWVSGTLFLFLGCVAWSSFYVLQSVTLKSYPAEMSLSSLICLAGASQASVVAAVAEHHSGARPWIVGWDFRLYGPLYSGIVSSAIAYYAQGLVLQSKGPVFLTAFNPLCMIIVSVLGYFLLSETLHLGSIIGAIIIAVGLYSVVWGKGKDSSDPTMTPTTTTTKQTELQQKQLPITSSDI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2848 367 MobiDBLite consensus disorder prediction 339 367 - -
Ahy17g2848 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 156 - -
Ahy17g2848 367 PANTHER WAT1-RELATED PROTEIN 8 357 - -
Ahy17g2848 367 Pfam EamA-like transporter family 191 331 IPR000620 GO:0016020|GO:0016021
Ahy17g2848 367 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020|GO:0016021
Ahy17g2848 367 MobiDBLite consensus disorder prediction 336 367 - -
Ahy17g2848 367 PANTHER WAT1-RELATED PROTEIN 8 357 IPR030184 GO:0016021|GO:0022857
Ahy17g2848 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2848 Ahy-Chr17 127590074 127595834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2848 7 337 Nodulin-like Gene Family AT2G37460 49.547 1.07e-116 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2848 - - gmx:100812537 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2848 17 127590074 127595834 Ahy17g2848 17 127590074 127595834 ECH
Ahy17g2848 17 127590074 127595834 Ahy8g0564 8 11104824 11110624 hybridization