Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2838 ATGGAGGACCTCGTCACGGAGGCCAGTCCTGGCAAGGCCGCCACGCCGCCTCCACCGCGCCGCAGCGTCCGGCGGAGGCTGGTCCAGTCTACTCTGTTTCCTCAGAAGCCACCTGAGCACAATGCGAAGGACAACGACGATAAAGGCAACGAAAATGACGACGAGTATTGTCCCTCTAGCAAGAACAAGAAGAGGAAGCGGAAGCCGAAGCCGAATCCGAAGCCGAAGCTCACTCCTCCTGAAAAACCCTCCAAGAATAGCACGCCGAAGAAGAATGCATCAGCTAATGGGAACAAGAGGTCAACTTCGAAGCAAGTGTTAACTGATTCTGACGAGGTTGCGACACATGTTCCTGATTTACGGTTAGAGGCAAAAATCTCAGCTGAGGAAAATGCGAGACTGTTTGCAGGACGGCAAATACATCCGTTTTTTTCCTCATGGAAGGCCGGGAAAAAATCTCAGGAGCAGGCTGAAATAGGAAATAAATTTTGTGCACATAAGAAGGATAGTGAAGCAATTACATCTGGTCCTATCCATGTATTTGAAAACGTCCAGGAGGATACGTTATGCCTTGACTGGAGAAACTGGACCTTTTTGGGAAAGGATAACTATGTGAATTATGCTCCTGGAAGTTATGATGATAAGACTCTTAGTGCTTTGGATACTTCAGGTGTTTCAATTTCTCATAATGCATTGACTTCGTCAGATAGACTCTCTATCCAGCCAGAAAACGTTCAGGCAACATCACTGTCAGAAAACTTAGCCATGCCAGCAAATGAACAAACAAATTTTCCTCAAATGCTAAAAGATGCTGAAGTGGACTTGAAAGTGGATGAGTCTGTTACTTTTTCTGGGCAAGCTCACATTTTCAGAAAGTCATATGCTGATCCACTCAGTAAATTTCTGCAAGAAAGTATGAAGTCTTACTACCACAACTGTAAAGATAAGGCTGAGAGCAGCTTATGGACATACAAGTACAAGCCAACAAAGGCCACCGAGGTTTGTGGTAATGATGAGTCGGTCAATTTTTTGCGTGACTGGTTACAACAATGGCATGAAAGACGTTACCAGGGGAGGAAGAATTCCTCTAACAGGGATAAATGGGACATGCAAGATGGTGATGATGATGATGATGGTGATTATAAATGTTCTCTCAGTGATTATGATTCAGAAGATCTAACTGAGGAGGATTCCCTGCACAATGTTCTTTTAATTACAGGGCCAATAGGGAGTGGCAAGTCTGCTGCTGTCTATGCTTGTGCTCAAGAGCAAGGGTTTGAGATTTTTGAGCTCAATGCATCGCATTGTCGAAATGGGCCTGCTGTCAAACAGTATTTTGGAGATACTCTTGGTTCGCTTGGTTTCAAAAGGTTACCAGAAGACATTGAAAGTTCACAAAAGAAAACAATGAAATTATCCCCTGCTATGGCTTTGCCCAAGGATAAAACAGCTGATGAGATGGATGATGGGATGGTTGAACTAATAACCATATCTGATGATGAAGCTTGTGGCCCTGCTGGAACATCACAGAAGTTACCTTGCAAAAATAGTGTACTTACATGTCATAAAGTCCAAACTTTAATTCTAATTGAGGAGGTAGACATCCTTTTTCCTGAAGATCGCGGATGCATTGCTGCCATACAACAGATTGCTGAGACAGCAAGGGGGCCAATAATATTGATCAGCAATAGTGATGATCCCCGCCTGCCAGATAATTTTGATAGGCTCAATCTTTCTTTCTCGTTGCCATCTCCTAAGGAGTTGCTTTGCCATTTGTACAAGGTTTGTGTCTCTGAAGGAGTCAACATCCATCCTCTTTTACTGGAGAAGTTTATACAGTCTTGTAATGGAGATATCAGGAAAACCATTATGAACCTCCAGTTCTGGTTTCAGAGAATGCAATTTAGAAAAGATGGAAAAGCACAAACAGGTTGTGGCTCACTTCCATTTGATCTTGAGCTTGGCCATCAAATCTTACCAAAACTAATTCCCTGGGATTTCCCCTCAGAATTATCTGAATTAGTTGAAAAAGAACTTGCAAACTCAATATCTATAACAGAAGAAAACTCTAGGTTGCAAGGTATGCAAAATGATTTAGATGCGCATGATATGGAGACTGATTATATAGAGGCCAAGAAGTTGGAGATGATTAAGAGGAATGAGACTACAGCTGACTATACTGAGCTTGAAATTCAATATAATATTTCTGAGATTTCTGATTCTTTTGGATCCCCACAAGCTTTGCCAACACAAAATGGTGGTCGACGGAAACTTATAGTGATGTCCTCTGATTCTGAGGATGAGGATCCAAATAATGTACATCTGCAATGCACTCATGATGAAGCTGACAAGAGCCAATCCCTCAATGATAATAATGAATCTCCCTCTAAGTTTCAATTGAATGAACATCACTCTGGCACGTCATTTCGCAAATTGGTTTGTTCTGAATTGGAGGATCAAGAGGAGGAATTTTTTAGATTTTCAGAAACAGCTAACACATGTGAATCATTAGATATATCCTGTGTGCCAGAGTCAACCTATGTTCCTGAAACTGCAATAGAGAATGAAATAGAGACAATGTCTGGGGCAGTGTCTTCTGGGCATCCTGCTGTTCCGCCAGAAATTTCAGTGAATAATGAGTTGAAACCATTGGGTGTTCGTAGGCGGTTAGTAAAATTTCCAGAAAATCCATGTTTGTTGGTTAATAATGGATTTCCAGAATCCCCTTCAAAAGAGGCTGTGCAAGATTTCTATAATGAAAATCCCGAAACTGCAATTGTCCACGTGATGGACGAGTGTAGTCGTGTGGATTTCCAGCTTAAGTCAAAGTTTGTTGAGTCCACTCCGATGATAGAGACAGATACAGTACAAAAATTGTGGAGAAATCTCCGTGAGTGTCAAACAGATTTAGGACGGCATGCCACGTCGGAGCAGCTAGGCGCATTTGAAGTGGTTAAACTGGTTAGCGAGCTAAGCAATCTAATTTCAGAAGCTGATTTGTTTTTTGATCACTGTGGACAATGTGATGTTATGGAACCTGCAATGTCCTTGTCTGGGGAAGCCACAGCTAGTTGGTATGATGAGGAAATAATGATGTCCACTGTTGCTGTTTCTGGGTTTTGCTTTTATGTTAATCGTATAGCAGATGAAGGATCAAAGTTAGGTTTTGAGAACAAGGTTGATTTAACTTCTGAGATGTTGGCTTCCACAACTAATATTATGACATTGGGGAAATTATCCAGAGCAGATCTCACAAAAAGCACTGATATCTATACCGGAAAGGAATCAGAGTTGGACAACCCAGTTCATGATGTGCATAAGAGTGAAAACAATACATCTCTGTTCAACATCATCCAGTCTATTGTTCCTGCAAGAATATCCTTGGTACTGAAAGGTGTTGCATTCAATGAATATCTATCTTCAATGCGCCAAATTTCAAGATCAGAAGATTTCCGAGTTTCACAAGGTGTTAGGAGACGAGGAAGGGTGCGGGGCAGTCAACATTACTTGAGTAAATGTACAATGTTATCTCCTGAAGATATATCATTAGTGAGTGAACGTGATTTCTGCAAAAAGATTTCTTCACAATGTACAGCGAACGAGGAAAACAAGCATACATGA 3621 0.4156 MEDLVTEASPGKAATPPPPRRSVRRRLVQSTLFPQKPPEHNAKDNDDKGNENDDEYCPSSKNKKRKRKPKPNPKPKLTPPEKPSKNSTPKKNASANGNKRSTSKQVLTDSDEVATHVPDLRLEAKISAEENARLFAGRQIHPFFSSWKAGKKSQEQAEIGNKFCAHKKDSEAITSGPIHVFENVQEDTLCLDWRNWTFLGKDNYVNYAPGSYDDKTLSALDTSGVSISHNALTSSDRLSIQPENVQATSLSENLAMPANEQTNFPQMLKDAEVDLKVDESVTFSGQAHIFRKSYADPLSKFLQESMKSYYHNCKDKAESSLWTYKYKPTKATEVCGNDESVNFLRDWLQQWHERRYQGRKNSSNRDKWDMQDGDDDDDGDYKCSLSDYDSEDLTEEDSLHNVLLITGPIGSGKSAAVYACAQEQGFEIFELNASHCRNGPAVKQYFGDTLGSLGFKRLPEDIESSQKKTMKLSPAMALPKDKTADEMDDGMVELITISDDEACGPAGTSQKLPCKNSVLTCHKVQTLILIEEVDILFPEDRGCIAAIQQIAETARGPIILISNSDDPRLPDNFDRLNLSFSLPSPKELLCHLYKVCVSEGVNIHPLLLEKFIQSCNGDIRKTIMNLQFWFQRMQFRKDGKAQTGCGSLPFDLELGHQILPKLIPWDFPSELSELVEKELANSISITEENSRLQGMQNDLDAHDMETDYIEAKKLEMIKRNETTADYTELEIQYNISEISDSFGSPQALPTQNGGRRKLIVMSSDSEDEDPNNVHLQCTHDEADKSQSLNDNNESPSKFQLNEHHSGTSFRKLVCSELEDQEEEFFRFSETANTCESLDISCVPESTYVPETAIENEIETMSGAVSSGHPAVPPEISVNNELKPLGVRRRLVKFPENPCLLVNNGFPESPSKEAVQDFYNENPETAIVHVMDECSRVDFQLKSKFVESTPMIETDTVQKLWRNLRECQTDLGRHATSEQLGAFEVVKLVSELSNLISEADLFFDHCGQCDVMEPAMSLSGEATASWYDEEIMMSTVAVSGFCFYVNRIADEGSKLGFENKVDLTSEMLASTTNIMTLGKLSRADLTKSTDIYTGKESELDNPVHDVHKSENNTSLFNIIQSIVPARISLVLKGVAFNEYLSSMRQISRSEDFRVSQGVRRRGRVRGSQHYLSKCTMLSPEDISLVSERDFCKKISSQCTANEENKHT* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2838 1206 Gene3D - 583 643 - -
Ahy17g2838 1206 MobiDBLite consensus disorder prediction 359 381 - -
Ahy17g2838 1206 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 84 1202 - -
Ahy17g2838 1206 CDD AAA 403 458 - -
Ahy17g2838 1206 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 84 1202 IPR004582 GO:0006281
Ahy17g2838 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 637 IPR027417 -
Ahy17g2838 1206 MobiDBLite consensus disorder prediction 1 112 - -
Ahy17g2838 1206 MobiDBLite consensus disorder prediction 39 61 - -
Ahy17g2838 1206 MobiDBLite consensus disorder prediction 782 802 - -
Ahy17g2838 1206 MobiDBLite consensus disorder prediction 83 110 - -
Ahy17g2838 1206 MobiDBLite consensus disorder prediction 788 802 - -
Ahy17g2838 1206 Gene3D - 319 580 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2838 Ahy-Chr17 127329784 127337341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2838 318 438 Core DNA Replication Machinery Family AT5G22010 28.689 6.97e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2838 - - gmx:100784209 1349.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2838 17 127329784 127337341 Ahy17g2838 17 127329784 127337341 ECH
Ahy17g2838 17 127329784 127337341 Ahy8g0557 8 10964203 10971690 hybridization