Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2824 ATGGCATCGGAGCTTCAATTGCCGCCTGGATTTCGATTCCATCCAACAGATGAAGAACTCGTGTTGCACTATCTCTGCCGTAAATGCACTTCACAACCGATTGCTGTTCCGATCATTGCCGAGATCGACCTTTATAAATATGATCCCTGGGACCTTCCTGGTATGGCATCCTATGGTGAGAAGGAGTGGTATTTTTTTTCACCTAGAGATAGAAAATATCCGAATGGGTCTAGACCGAATCGGGCTGCAGGAACTGGTTACTGGAAGGCAACCGGAGCCGATAAGCCTATTGGACAACCCAAACCAGTTGGGATTAAGAAAGCTCTGGTCTTTTACTCTGGAAAGGCTCCCAAAGGAGATAAGACCAATTGGATTATGCACGAATATCGTCTTGCAGACGTAGATCGTTCTGTTCGCAAAAAGAATAGCCTCAGGCTGGATGACTGGGTGCTGTGTCGCATCTACAATAAGAAAGGATCAATCGAGAAGCAACAACCGAGCAGCGGCGTCAGTACCGTCGTGAACCAGAAGGCCGAATCTTCGGAAGTCGAAGACAAGAAGCCCGATATAGTTCCACGTGGCGGCGGCGGGGGCGTACTTCCACCGCATCCTCCTACGGCTCAGGCTTCGGCAGGCGGCGTGACGACAGATTATATGTACTTCGACAACTCCGATTCGGTTCCGAAGCTTCACACGGACTCGAGTTGCTCGGAGCAGGTGGTGTCGCCGGAGTTTGCGAGCGAGGTTCAGAGCGAGCCAAAGTGGAACGAGTGGGATAAAAACCTCGAAAGTGCGTATAATTACCTCGATGCCACACTCACCAACGGTTTTGGGTTCCCGTTTCAGGGTAACAATCAGATGTCGCCGCTCCAGGATATGTTCATGAACCTTCCGAAACCGTTCTGA 906 0.5044 MASELQLPPGFRFHPTDEELVLHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALVFYSGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGSIEKQQPSSGVSTVVNQKAESSEVEDKKPDIVPRGGGGGVLPPHPPTAQASAGGVTTDYMYFDNSDSVPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWDKNLESAYNYLDATLTNGFGFPFQGNNQMSPLQDMFMNLPKPF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2824 301 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Ahy17g2824 301 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Ahy17g2824 301 MobiDBLite consensus disorder prediction 162 178 - -
Ahy17g2824 301 PANTHER NAC TRANSCRIPTION FACTOR 56 2 279 - -
Ahy17g2824 301 MobiDBLite consensus disorder prediction 162 204 - -
Ahy17g2824 301 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Ahy17g2824 301 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Ahy17g2824 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2824 Ahy-Chr17 127095625 127097755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2824 1 301 NAC Transcription Factor Family AT1G01720 68.387 2.16e-147 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy17g2824 NAM 1.90E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2824 - - gmx:732553 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2824 17 127095625 127097755 Ahy8g0543 8 10764983 10767081 hybridization