Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2818 ATGGGTCAGGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAGTATGAGCATGAGGAAGAAAAACATGAGGAAGTTGACGTGGATTATATGGATGAGGACGACATAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTGGGATGATAGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATCGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGCGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTATTGGGCAGATATATCAGGCATTAGCAAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCAGGTGATGCATATGCAGCTTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTTTAATCATCACATGGATGCCGATGGTACTTTGCGCAATTTATTCTGGTGCGATGGTCTCAGCAGGGCCGACTACTCATTATTTGGCGATGTGCTGGCGTTTGATGCTACCTATAAGAGGAATAAATATATGTGTCCACTGGTGGTATTTTCTGGTGTCAATCATCACAATCAAACAATTATCTTTGCTGCTGCTTTAATTTGCGATGAGGAAAAAGACACATACAGGTGGTTGCTACAACAACTGAAGGTGGCAATGAATGGGAAAGCACCTGTTTCGGTGATCACGGATGGTGATCTATCAATGAAGTTCGCCATTGAGAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTCGCAACGCAACAAGTAACATTGGCAAGCCCCAGTTTACATCCATGTTTAGAAAGTGTATGCTAGGCGACTATGAAATTGATGTATTTCGTCAAAAGTGGTTTGAAATGGTTGAGGGATTTGGTGTCAAAAACAAGAATTGGGTCCTAGATATGTATAAAAAGAGACATTCATGGGCAACTGCACATATAAGAGGGAAGTTTTTTGCTGGTTTTCGGACTACTTCTCGGTGCGAGGGATTAAACTCGATCATTGCAAAGTATGTCAACTCAAGGTACAATCTGGTTGAGTTCATTCAACACTTTAATCGTTGTGTCGACCATATAAGGTGGAAAGAGGTCCAGGATGACCTCGCCTCTGTGAATGGGAGACCCAGTATGCAAACCTATTTTCAACAGTTAGAGAGGAGTGCTGCCAATGTTTACACCCTATCAATATTTCATATGTTCCAACCAATCCTTGTACGGGCTGCATCAATGAAGGTAATAAATATGAGGCAAACTGGCTCTTATGTGATTTACTCTGTCGGTTTGGACCAAACGCCAAATGAGATGTGGCGTGTATTCTGTTGTGACATTGAGATGGAATTCAATTGTTCATGTATGAGAATGGAATCGCTAGGCATACCTTGTGAACACATAGTTTGCGTCTTGGTGCATGAAGATATAGAGGAGTTGCCAAGGTCATTAGTGTTGCCTCGGTGGACCAAGACTGCCAAAGTGGGTTTGCAAAATGCGGTCGGGCTTCATTGGGATTCTTTGATGCTAAGTCAGTACGGTTGTTTGATGGATTGGTTTAGACAACTAGCCAACTTTGCTTGCCGAGATAACGAGAGATTTATCTTTACACAGGAAATGGCTATGAATTTGTTGAAACAATTTAAGGAGGAATATGCTGCACAAAAAGGGGGGGTCAATGATGCAGATAATGTAAGAGATGGTGTGCAAGTGGATGCTTCTGGAGCTGGGCTCGCAACCAATGATCTCGGACATAGCATGCCAAGGGACCCAAGAAAATGTAAGACAAAAAGGGGGGCTTCACAGTCCAATAAAAGAAAACATCGATGTGGACAGTGTGGCATGGAGGGCCACAATCGAACAACTTGTCGTGTTCGTCGTGGCATCTCACAGTCAGAAGGCCTTGGAAATGACACATTTGATAATGACTCGGATGACCACATGAACATTGAAGATGACTCATTGGTATATGATGAGAGTGCTTCCTACAGTAGCAATGAGGTGCTGTAA 2418 0.4264 MGQEFSHEGVNSEHTSYDQYEHEEEKHEEVDVDYMDEDDINVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRTRKSRAGALKLKNFVCHREGFRPPNNYGIGNLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKKGGISIGQIYQALANQAGGYEYLSFTQRDMYNKIAKQRRQLPGDAYAALKYLEDQATNDPSLYFNHHMDADGTLRNLFWCDGLSRADYSLFGDVLAFDATYKRNKYMCPLVVFSGVNHHNQTIIFAAALICDEEKDTYRWLLQQLKVAMNGKAPVSVITDGDLSMKFAIEKEFPNAHHRLCAWHLIRNATSNIGKPQFTSMFRKCMLGDYEIDVFRQKWFEMVEGFGVKNKNWVLDMYKKRHSWATAHIRGKFFAGFRTTSRCEGLNSIIAKYVNSRYNLVEFIQHFNRCVDHIRWKEVQDDLASVNGRPSMQTYFQQLERSAANVYTLSIFHMFQPILVRAASMKVINMRQTGSYVIYSVGLDQTPNEMWRVFCCDIEMEFNCSCMRMESLGIPCEHIVCVLVHEDIEELPRSLVLPRWTKTAKVGLQNAVGLHWDSLMLSQYGCLMDWFRQLANFACRDNERFIFTQEMAMNLLKQFKEEYAAQKGGVNDADNVRDGVQVDASGAGLATNDLGHSMPRDPRKCKTKRGASQSNKRKHRCGQCGMEGHNRTTCRVRRGISQSEGLGNDTFDNDSDDHMNIEDDSLVYDESASYSSNEVL* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2818 805 MobiDBLite consensus disorder prediction 14 29 - -
Ahy17g2818 805 MobiDBLite consensus disorder prediction 712 747 - -
Ahy17g2818 805 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Ahy17g2818 805 PANTHER OS02G0262500 PROTEIN 77 683 - -
Ahy17g2818 805 SMART 26again6 587 614 IPR006564 GO:0008270
Ahy17g2818 805 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 683 IPR031052 GO:0006355
Ahy17g2818 805 MobiDBLite consensus disorder prediction 760 774 - -
Ahy17g2818 805 Pfam MULE transposase domain 299 393 IPR018289 -
Ahy17g2818 805 MobiDBLite consensus disorder prediction 1 29 - -
Ahy17g2818 805 MobiDBLite consensus disorder prediction 760 785 - -
Ahy17g2818 805 ProSiteProfiles Zinc finger SWIM-type profile. 564 612 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2818 Ahy-Chr17 127003959 127006463 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g2818 MULE 7.80E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2818 - - ahf:112723376 1635.54