Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2807 ATGGAGCTTGTTGATACTACAAAGATTCAACAACAACAACAACATTTTCATGTCTTGGCAGTTGATGATAGTGTCATTGATAGAAAACTCTTGGAGAGGCTCCTTAGAGATTCTTCATGCAAAGTTACATGTGTGGACTCTGGTGACAAAGCTTTGAAATATCTTGGGCTTGTTGACGATGATGATGAACATCAAAATAATAATAACAATAATAATAATAATAGTTCTTCTTCATCAACCTCTTCAGAATCTTCTTCATTTTCTAATTCTTCTCCTTCTCCTTCTCCTCAACCATTACAACAAGAGGGAATGAAAGTGAATTTGATCATGACGGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTTGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCACCATGTGCTTGGAAGGAGGGGCAGAAGAGTTTCTATTGAAACCTCTTCAGTCAGAAGATTTAAAGAAGCTTCAACCCTATTTTCTGAAACCACTTGATAATAATTCAAGTGAAGAAGGAGAATCTGCTAATAGTTCTATAGATTCAGACAATGAAAATAATCTCATCAGCAATAATAATAATAATAATAATAATAATAATAATAATAATAGTATTAGCAAAAGGAAGGCTATGTCTCCTGATGAGCCTCCAGAAAGATCAAGACCCAAAATGAAAGGGTTGGAAGTGGTGTAA 741 0.3495 MELVDTTKIQQQQQHFHVLAVDDSVIDRKLLERLLRDSSCKVTCVDSGDKALKYLGLVDDDDEHQNNNNNNNNNSSSSSTSSESSSFSNSSPSPSPQPLQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRITMCLEGGAEEFLLKPLQSEDLKKLQPYFLKPLDNNSSEEGESANSSIDSDNENNLISNNNNNNNNNNNNNSISKRKAMSPDEPPERSRPKMKGLEVV* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2807 246 Gene3D - 17 225 - -
Ahy17g2807 246 MobiDBLite consensus disorder prediction 181 246 - -
Ahy17g2807 246 SUPERFAMILY CheY-like 16 55 IPR011006 -
Ahy17g2807 246 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 9 245 - -
Ahy17g2807 246 MobiDBLite consensus disorder prediction 67 100 - -
Ahy17g2807 246 ProSiteProfiles Response regulatory domain profile. 17 178 IPR001789 GO:0000160
Ahy17g2807 246 MobiDBLite consensus disorder prediction 227 246 - -
Ahy17g2807 246 MobiDBLite consensus disorder prediction 181 225 - -
Ahy17g2807 246 SUPERFAMILY CheY-like 104 173 IPR011006 -
Ahy17g2807 246 SMART REC_2 16 174 IPR001789 GO:0000160
Ahy17g2807 246 MobiDBLite consensus disorder prediction 60 100 - -
Ahy17g2807 246 Pfam Response regulator receiver domain 103 172 IPR001789 GO:0000160
Ahy17g2807 246 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 245 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2807 Ahy-Chr17 126754329 126758059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2807 13 243 Response Regulator Gene Family AT3G57040 44.000 3.41e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy17g2807 Response_reg 3.80E-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2807 K14492 - gmx:100801334 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2807 17 126754329 126758059 Ahy8g0533 8 10508784 10511878 hybridization