Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2800 ATGGCCATGGGGGATTCAAGGGTTGACACAATTGCACGCTTAGCTCAATGGAAAATCGATAACTTCGGACCTTGTTCCTACAAGAAATCTGACCCTTTCAAGGTCGGAATCTGGAATTGGTACTTATCCATAGAGAGAAACAGGTACCTCTACATACACCTGTTTCCAGAACCTTCTCGTGTCTCCAAGGAGCAGCCACCCGTTGCTCGTTTCATTCTTCGTGTTTCCAATGCTGGCTCTTCCCGCAGGTTCTATATTTCCCCTGTCCATGAAAGGATACTTAGGACATATGATGACTTTGTCTGGCCTGTTGATACTTCATTTGTTGGTCGCTTCATTATTGATGTTGAATTTCTTGACTTGAAGATATGCCCTCTGAATGGTGGGGAAGCTAGTTCTATATGGCCATCCGAGGGAAAATTGCAATCCATTGCATCTCAAAGTACTCTTAGTTGCCTCTCACGCATGCTTGATGATGCTATTCATGCTGACCTAACCATTATTACAGCTGATGGTACATTGAGAGCTCACAAGGCAATCTTGTCTGCAAGTTCGCCGGTGTTCCAGAGTATGTTTCATCACAACCTGAGGGAGAAAGAGTCATCTACTATCCATATAGAAGACATGTCGCTAGAATCTTGCACGGCTCTTCTAAGATACTTGTATGGAACAATCAAGCAAGACGATTTCTGGAAACACCGGCTTGCATTGCTTGGAGCAGCCAATAAATATGACATCACCGGTCTCAAAGACGTGTGCGAAGACAGTCTGCTGGAAGATCTTAACTCCGGAAATGTTCTCGAGAGGCTCAACGAAGCTTGGCTTTATCAATTACACAAGTTAAAGAAAGGATGCTTGACCTTCTTATTTGACTTCGGAAAGATATATGATGTTAGAGATGAAGTAAACAACTTTTTTCAGCATGCTGATAGGGAGCTAATGATGGAGATGTTTCAGGAAGTGCTCACAGTTTGGAGACCGGTATAA 987 0.4336 MAMGDSRVDTIARLAQWKIDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRVSKEQPPVARFILRVSNAGSSRRFYISPVHERILRTYDDFVWPVDTSFVGRFIIDVEFLDLKICPLNGGEASSIWPSEGKLQSIASQSTLSCLSRMLDDAIHADLTIITADGTLRAHKAILSASSPVFQSMFHHNLREKESSTIHIEDMSLESCTALLRYLYGTIKQDDFWKHRLALLGAANKYDITGLKDVCEDSLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFDFGKIYDVRDEVNNFFQHADRELMMEMFQEVLTVWRPV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2800 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Ahy17g2800 328 PANTHER OS08G0495500 PROTEIN-RELATED 4 328 IPR044714 -
Ahy17g2800 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Ahy17g2800 328 CDD MATH 17 103 IPR002083 GO:0005515
Ahy17g2800 328 Pfam BTB/POZ domain 157 259 IPR000210 GO:0005515
Ahy17g2800 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Ahy17g2800 328 SUPERFAMILY POZ domain 146 259 IPR011333 -
Ahy17g2800 328 Gene3D Potassium Channel Kv1.1; Chain A 137 290 IPR011333 -
Ahy17g2800 328 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 4 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2800 Ahy-Chr17 126624820 126627578 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ahy17g2800 BTB 2.40E-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2800 K10523 - rcu:8278000 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2800 17 126624820 126627578 Ahy10g1602 10 92747774 92751766 hybridization