Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2797 ATGGCAAGCGTTCTTAGACAGCAGCAACAGCCAGCAGGGAGTGGTGGTAACAACCGCGTGGTTGCCGTGAGTGCCACACCTCCCAATAATATCCTCCATATTCATGCTGATGCCCCCTCAAATCACGAGAAAAAAGGGTGGAAGAAGTTTCTGTCATTTATAGGGCCTGGTTTTCTCGTCTCTCTCGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAATCACCGATACGAGCTGCTGTGGGTGATACTTATCGGATTGATATTTGCTCTTATTATTCAGTCATTAGCTGCAAATCTTGGCGTAAGCACAGGGAAACACCTTTCAGAGATATGCAAAGCGGAGTATCCAAGACTCGTTAGGTACTGCTTATGGTTATTAGCTGAGCTTGCTGTCATAGCCGCAGACATTCCAGAAGTGATTGGAACGGCGTTTGCACTGAACATACTATTCCACATCCCAGTATGGGGAGGAGTTCTAGTGACTGGGTGCAGCACTCTGTTGCTTCTTGGTCTCCAGAGATTTGGGGTAAGGAAGTTGGAGTTGCTGATATCAACGCTGGTATTTGTGATGGCAGCATGTTTCTTTGGAGAAATGAGTTACGTGAAACCACCAGCGTCTGGTGTCATAAAAGGCATGTTTATTCCCAAACTCAGTGGTCAAGGTGCCACTGCCGACGCCATTGCCCTTTTAGGTGCCCTTGTCATGCCGCACAACCTCTTCCTCCACTCTGCTCTGGTGCTGTCTAGGAAAGTACCTAATACAGTTCGTGGCATCAATGACGCGTGTAAATATTTTCTGATAGAGAGTGGGTTCGCACTGTTTGTGGCATTTCTGATCAACGTTGCAGTTATTTCTGTGTCTGGCACTGTTTGCTCAGCTTCAAATCTTTCTTCGGAAAACACTGATCATTGCAGCGATCTCACCCTTAACTCTGCTTCCTTTCTTCTCAAGAATGTGTTGGGAAGGTCTAGCTCAACGATTTATGCAATAGCACTATTAGCCTCAGGACAAAGTTCCGCTATTACTGGAACCTATGCAGGACAGTACATTATGCAGGGTTTCTTAGACTTGAAGATGAAAAGATGGCTTAGGAACTTGATGACTAGGACCATTGCCATAGCACCAAGCCTTGTTGTCTCCATTATTGGTGGCTCCTCCGGTGCCGGTCGACTAATCGTCATCGCATCGATGATACTTTCTTTTGAGCTTCCGTTTGCTTTAATTCCACTCCTTAAGTTTAGTAGCAGCAGTACCAAGATGGGACCTCACAAGAACTCTATGATAATAATTGTCATCTCATGGATCCTAGGATTGGGAATCATAGGCATCAATGTGTACTACCTCATCACTGCCTTCGTGGGTTGGCTAATTCATAATAGTTTGCCAAAGGTGGGAAATGTGTTCATTGGGATCATAGTGTTTCCTCTCATGGCAATCTATGTCGGCTCAGTTATATACCTAACATTCAGAAAAGACAATGTTCAGACATATATTGAGACCAAGGATAACACAGCAATGCAAACCCATGTGGAAAAGGGGTTCATGAATTCTAATGGTGAGTTAGAGTTGAACCATGGCCCTATCAGAGAAGATTTAGCTGATATCCCACTACCGGAATAA 1638 0.4493 MASVLRQQQQPAGSGGNNRVVAVSATPPNNILHIHADAPSNHEKKGWKKFLSFIGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVSTGKHLSEICKAEYPRLVRYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWGGVLVTGCSTLLLLGLQRFGVRKLELLISTLVFVMAACFFGEMSYVKPPASGVIKGMFIPKLSGQGATADAIALLGALVMPHNLFLHSALVLSRKVPNTVRGINDACKYFLIESGFALFVAFLINVAVISVSGTVCSASNLSSENTDHCSDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKRWLRNLMTRTIAIAPSLVVSIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVISWILGLGIIGINVYYLITAFVGWLIHNSLPKVGNVFIGIIVFPLMAIYVGSVIYLTFRKDNVQTYIETKDNTAMQTHVEKGFMNSNGELELNHGPIREDLADIPLPE* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2797 545 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 PRINTS Natural resistance-associated macrophage protein signature 232 255 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 PRINTS Natural resistance-associated macrophage protein signature 402 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 MobiDBLite consensus disorder prediction 1 20 - -
Ahy17g2797 545 PANTHER METAL TRANSPORTER NRAMP5 40 545 - -
Ahy17g2797 545 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 48 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 Hamap Divalent metal cation transporter MntH [mntH]. 36 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 545 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g2797 545 Pfam Natural resistance-associated macrophage protein 71 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2797 Ahy-Chr17 126554301 126561037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2797 14 544 Inorganic Solute Cotransporters AT1G15960 58.505 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2797 K21398 - gmx:100787785 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2797 17 126554301 126561037 Ahy17g2797 17 126554301 126561037 ECH
Ahy17g2797 17 126554301 126561037 Ahy8g0518 8 10266674 10272551 hybridization