Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2793 ATGTCGAACCGTCGTTCATCGTTTTCTTCCTCAACGACGTCGTCTTTGGCAAAACGCCATGCATCGGCGTCGTCAACCGAAAACCACAACGCGGGAAAGGTTTCCCTTGCGAAGAAGCGAGCGCCGCTAACAAACCTCACCAATAACATTTCTCGACGCTCTTCTCTGGTACCTTGTGCTACTAAAGTTGCTAAGACGAAGAAAGAGGCTTCATCATGTAACACTACTACAACTTGTTCTTCAATTTCAAGCAACAAGATACCGATTTTGCAGAGTGCTGTAAAGTGCAATGCTGTTGTTTTTCCGAAGCCTAGTTATGTCTCTGCAAGGGAAGAAGATGGGGCATCTGTTTCCATGTCTGTGGATGAGACCATGTCTTCTTGTGAATCTTTCAAGAGCCCTGACATTGAGTATTTGGACAACAATGATATCGCGCCGGCCGTTGATTCAATTCAGAGGAAGACATTCAGCACCCTCAACATTTCTGATACTCCAGAGCCACCAGCAGGGAACATATGCAGTAGAGACATACTTGTTGAGTTGGAGAAAGATGACAAAGTTGTGAATGTTGATAACAACTTCATGGATCCCCAGCTTTGTGCAACATTTGCTTGTGATATATACAAGCACCTGCGTGCATCTGAGGCAAAGAAAAGACCTTCCACGGACTTCATGGAGAGTGTTCAGAAGGACATAAATCCCAGCATGCGTGCTATATTGATTGATTGGCTTGTTGAGGTAGCCGAAGAGTATCGATTGGTACCTGATACATTGTATTTGACAGTGAACTACATAGATAGGTATCTTTCAGGGAATCCAATGAACAGGCAAAAATTACAATTACTTGGTGTTGCTTCCATGATGGTTGCCTCTAAATATGAGGAGATTTGTGCACCCCAGGTAGAGGAATTTTGTTACATCACCGACAACACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCTTGAATTATCTGAAGTTTGAAATGACAGCTCCAACAATTAAGTGTTTCTTAAGACGGTTCGTTCGTGCAGCTCAAGGAGTCAGTGAGACCCCTTCGTTGCAACTAGAGTGCTTGACAAACTACATTGCCGAATTGTCTTTGTTGGAGTACAGTATGCTTTGTTATGCTCCGTCACTAATAGCTGCTTCTGCAATTTTTCTAGCCAAGTTTATACTCTCCCCCTCAACCAAACCATGGAATGCTACATTGAAGCACTATACACAATACCAGCCCTCTGATTTGTGTAGTTGTGTAAGGGATCTCCATCGACTTTGTTGCAACAATCCTAACTCCAATTTGCCTGCAATTAGGGAAAAGTATAGTCAGCACAAGTACAAAAATGTGGCCAAGAAGTGTTGCCCTTCCTCAATACCTTCAGAATATTTTCAGAATTGA 1407 0.4286 MSNRRSSFSSSTTSSLAKRHASASSTENHNAGKVSLAKKRAPLTNLTNNISRRSSLVPCATKVAKTKKEASSCNTTTTCSSISSNKIPILQSAVKCNAVVFPKPSYVSAREEDGASVSMSVDETMSSCESFKSPDIEYLDNNDIAPAVDSIQRKTFSTLNISDTPEPPAGNICSRDILVELEKDDKVVNVDNNFMDPQLCATFACDIYKHLRASEAKKRPSTDFMESVQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQKLQLLGVASMMVASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTIKCFLRRFVRAAQGVSETPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLAKFILSPSTKPWNATLKHYTQYQPSDLCSCVRDLHRLCCNNPNSNLPAIREKYSQHKYKNVAKKCCPSSIPSEYFQN* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2793 468 MobiDBLite consensus disorder prediction 1 40 - -
Ahy17g2793 468 SMART cyclin_7 339 427 IPR013763 -
Ahy17g2793 468 SMART cyclin_7 242 326 IPR013763 -
Ahy17g2793 468 Gene3D - 206 454 - -
Ahy17g2793 468 PANTHER CYCLINS 73 467 IPR039361 -
Ahy17g2793 468 SUPERFAMILY Cyclin-like 196 332 IPR036915 -
Ahy17g2793 468 CDD CYCLIN 236 325 IPR013763 -
Ahy17g2793 468 Gene3D - 220 333 - -
Ahy17g2793 468 ProSitePatterns Cyclins signature. 237 268 IPR006671 -
Ahy17g2793 468 CDD CYCLIN 333 426 IPR013763 -
Ahy17g2793 468 PIRSF Cyclin_A_B_D_E 1 466 IPR039361 -
Ahy17g2793 468 Pfam Cyclin, N-terminal domain 206 332 IPR006671 -
Ahy17g2793 468 MobiDBLite consensus disorder prediction 1 32 - -
Ahy17g2793 468 Pfam Cyclin, C-terminal domain 335 456 IPR004367 -
Ahy17g2793 468 SUPERFAMILY Cyclin-like 335 460 IPR036915 -
Ahy17g2793 468 PANTHER CYCLIN-A1-1 73 467 - -
Ahy17g2793 468 SMART Cyclin_C_2 335 458 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2793 Ahy-Chr17 126461903 126465535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2793 1 468 Core Cell Cycle Gene Families AT1G44110 63.502 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2793 K06627 - gmx:100789565 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2793 17 126461903 126465535 Ahy17g2793 17 126461903 126465535 ECH
Ahy17g2793 17 126461903 126465535 Ahy8g0515 8 10194662 10198427 hybridization