Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2745 ATGGTTTTCGATCGGTGGGATAAGTTATTGTGTGAAGCTGCTATTGTTGAGAACGAGAGCGAGAGATTCATGTATTGCCCCTTCAAGGACTGCTCTGCCCTTATGATCGTCGACGATGATTCACCAACGGAATCAGAATGCCCTAGCTGTAATAGGCAGATCTGCGTCACGTGTGAGGCAGTTTGGCATCATGGGATCACGTGCAAGGAATTTGGGAGGACAGATAATGAATATAGAGTAGTGATGGAGGTAGCGGCCAGGAACCAGTGGATGAGGTGCCCAAACTGCAGGTTCTTTGTTGAGAAAAAACGTTTCACGTGCGATAAAATCCGTTACAGATGCGGATATTTGTTCTGTTACGGCTGTGGAAATAGTTGGGATTCCACCTACGAGTGTTATCTCACCACCCTCGATACAACCCTCAAGAAAAATACTACTCATCCTTTAAATACTGTCCTTGATTCATTCAATCTGCACTCTGTTTTAGCAGTTCTATCTGTACTCTTATTGCGCTCCACGCGCCTTTTTTTTATCGCGCTCTACGCGCCCTCTTTCATTACGCTCTACGCGCCCTCTGAAGATCACTTTTATTGCGACATACGCGTCTTCTAA 612 0.4559 MVFDRWDKLLCEAAIVENESERFMYCPFKDCSALMIVDDDSPTESECPSCNRQICVTCEAVWHHGITCKEFGRTDNEYRVVMEVAARNQWMRCPNCRFFVEKKRFTCDKIRYRCGYLFCYGCGNSWDSTYECYLTTLDTTLKKNTTHPLNTVLDSFNLHSVLAVLSVLLLRSTRLFFIALYAPSFITLYAPSEDHFYCDIRVF* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2745 203 SMART ibrneu5 4 68 IPR002867 -
Ahy17g2745 203 ProSiteProfiles TRIAD supradomain profile. 1 144 IPR044066 -
Ahy17g2745 203 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 2 129 IPR031127 GO:0004842|GO:0016567
Ahy17g2745 203 SUPERFAMILY RING/U-box 18 71 - -
Ahy17g2745 203 SUPERFAMILY RING/U-box 79 134 - -
Ahy17g2745 203 Gene3D - 66 148 - -
Ahy17g2745 203 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 2 129 - -
Ahy17g2745 203 Pfam IBR domain, a half RING-finger domain 6 68 IPR002867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2745 Ahy-Chr17 125810999 125812028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2745 24 123 C3H Transcription Factor Family AT2G19610 29.661 1.12e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2745 K11975 - ath:AT3G14250 142.895