Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2734 ATGGAGCCTCAGACTCAGGAAGCATCAAATAGTCAAAGACACACAAGTGATCAAAATGTGCATAATGTTAGTGATCATGTGGATGAAGACGTAACTTCTGATGCAGTGGATATGGATCAATATCGCATAAACTCTTGGGAAGATATTGGTAAGATTGATTTTTCAAGTCTATCTATGAAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAGACGAGGGGCTTCAGTGTGCGAAAGAGTAGGAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCCAAAACCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATGTTTTCTTCGATGCGGTAACTGAGAGTTGGGTAGTGAGAGATTTTTATGATGAATACAACCATGATCTTGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCTGACATTAGTCAAATGAACCATATGAAAGAGGTGGGGATCAGCATACCAAACATATTTGGGTCATTAGCTAGCCAGTGTGGTGGGTACGAGAACGTTAATTTTTCAATTAAGGATATGCACAATCAAGTTGCAAAGCAAAGAAGACAATTACCTGATGATTTAACCTTTGCAATGGCTTACCTGGAAACGCTAGCAGCAAGGGATCGAAACTTGTTCTATAGTGTTGAAAAGGGTAGAAAAGAAGTGTTTTGGCAAATTTTTTGGTGTGATGGCCGGTGTCAGTTGGATTACGATCTGTTCGGGGATGTGCTAGCATTTGACGCCACATATAAGAAGAATAGATACAGATTGCCGGTGGTAATATTCTCGGGAGTTAACCACCATAATCAAACCGTTGTATTTGGTGCTGCGATAGTTTCGAATGAGAGGAAAAGCACCTATGTGTGGTTACTAAAACAACTTCTCATTGCAATGAAGGGAAAGATACCGACTTCAGTAATTACGGATGGTCATCAATCGATGGCTATTGCTATTCAGGAAGTGTTTCCGAATGCACATCATAGGTTATGTGCATGGCACTTGATGCGTAATGCAACAAGTAATATTCACAAACCTCAGTTTACGAAAATGTTTACAAAGTTAATGCTAGGTGATTACGAAGTTGGTGTGTTCGAACAAAAGTGGGAGGAAATGGTTGGATTCTTTGGAGTGGAAGATCGGGAATGGATAGTAGATATGTATGGGAAAAGAAACATGTGGGCTACCGCTCATATCCGAGGAAAATTCTTTGCTGGGTTTAGAACGACTTCGAGGTGTGAAAGTCTACATGCTGTCCTCAAAAGATATGTTAAATCACGCCATAATTTGACAGAATTTGTTGACCACTTCCAGCGTTGTTTGAGCTACATGCGGCACAGAGAGGATTTGGCAGACTTTAAATCATCAACTGGACAACCTATGATGCAGACACACTTTCAACAATTAGAAAGGTCAGCATCTACCATTTATACCCGGCAAATTTTTATGTTGTTCCGTTCAATGCTCCACAAGGCCAGCACATTGAAGGTAATATATGAAAAGGAAACGAGTTCTTGCAAGATTTATCAGGTGTCAAAATTTTACAAGCCTAACATGATATGGCATGTGTCTTTTCACGAAGAGCAAGTTGAATTTAAATGCTCATGCATGAGAATGGACTCCATAGGTATTCCATGCAGTCATATACTTGCTGTTTTGGGTTTTCTAGACATTGCAGAGCTGCCAAAATCATTAGTGCTGCGAAGATGGACTAGAAAAGCGAAGGAAGGAATTAGTGGGTATGATGACATGGGAGGCTTGATGGAGGATTCCTTGGCTATCAGTCGGCGTGCATGTTTGGCACATTGGGCTCATAGTGGGGACAATAACATGATGGAGGGGCATGCGGAATACATGTACGAAGACCTTGCAAAGAATGGAAGTACTGAGATAGAGACCACAAGGAAGCCTAAGCGTTGCAGCTACTGTCGCAAGAGGGGTCATAACATTGCTACGTGTTCCATGAGGAAAATAGATGAAAGCACTCCCCAATTTGATGATGACGCTGTGGAGAATATTGAGGGTGAAGACTACTCCTTCGTAGATGCTGAAAGTGATGAGTATGTTCACACTGAATGGTTTGAGGAGGAAGATGAAGATTTAGATTCCTCAAGGTATTATGAACAGAGTGGTGGCGAGACTGAGTTCTCAATGGATTACGATTCTGGTGGGGCAAATGATGATGATGAGGCATAG 2277 0.4071 MEPQTQEASNSQRHTSDQNVHNVSDHVDEDVTSDAVDMDQYRINSWEDIGKIDFSSLSMKNICQLHFADLGLAFEFYNSYAKTRGFSVRKSRSRIVDGKVREKWNHMKNRVREPKPETRCGCMSKLHVFFDAVTESWVVRDFYDEYNHDLVVPKLARMLRSHKKMTEPDISQMNHMKEVGISIPNIFGSLASQCGGYENVNFSIKDMHNQVAKQRRQLPDDLTFAMAYLETLAARDRNLFYSVEKGRKEVFWQIFWCDGRCQLDYDLFGDVLAFDATYKKNRYRLPVVIFSGVNHHNQTVVFGAAIVSNERKSTYVWLLKQLLIAMKGKIPTSVITDGHQSMAIAIQEVFPNAHHRLCAWHLMRNATSNIHKPQFTKMFTKLMLGDYEVGVFEQKWEEMVGFFGVEDREWIVDMYGKRNMWATAHIRGKFFAGFRTTSRCESLHAVLKRYVKSRHNLTEFVDHFQRCLSYMRHREDLADFKSSTGQPMMQTHFQQLERSASTIYTRQIFMLFRSMLHKASTLKVIYEKETSSCKIYQVSKFYKPNMIWHVSFHEEQVEFKCSCMRMDSIGIPCSHILAVLGFLDIAELPKSLVLRRWTRKAKEGISGYDDMGGLMEDSLAISRRACLAHWAHSGDNNMMEGHAEYMYEDLAKNGSTEIETTRKPKRCSYCRKRGHNIATCSMRKIDESTPQFDDDAVENIEGEDYSFVDAESDEYVHTEWFEEEDEDLDSSRYYEQSGGETEFSMDYDSGGANDDDEA* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2734 758 ProSiteProfiles Zinc finger SWIM-type profile. 546 584 IPR007527 GO:0008270
Ahy17g2734 758 MobiDBLite consensus disorder prediction 1 31 - -
Ahy17g2734 758 MobiDBLite consensus disorder prediction 721 758 - -
Ahy17g2734 758 Pfam FAR1 DNA-binding domain 75 151 IPR004330 -
Ahy17g2734 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 66 640 IPR031052 GO:0006355
Ahy17g2734 758 SMART 26again6 559 586 IPR006564 GO:0008270
Ahy17g2734 758 Pfam SWIM zinc finger 560 580 IPR007527 GO:0008270
Ahy17g2734 758 MobiDBLite consensus disorder prediction 1 18 - -
Ahy17g2734 758 Pfam MULE transposase domain 271 365 IPR018289 -
Ahy17g2734 758 PANTHER OS01G0607050 PROTEIN 66 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2734 Ahy-Chr17 125455354 125459833 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g2734 MULE 7.70E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2734 - - ahf:112719698 1480.69