Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2733 ATGGCTATGGAGCAATCATCAAATATTAGGAATGTAAAGCTTCCGCTGATGCTTCTTGTTGCTGTTGCAGCTCTCCATTATTGTGCAGCAGCTAACTGCACACGTAGCTGCGGCTCCGTGAGCATTCCATTCCCGTTTGGGACCACAAAGGAGTGCTCCCTCGCCCCCGAATTCCTTATCTACTGCACCAATAAACATGTCCCACACTTACAAGACAATCACCTGCGTCTGCGAAGCATCGATGTCGATCACGGCGAACTCCGCGTTTCCTTGCCGGTAGCCAGTGATTGCTACTTCACCAACAGCAGCAGCAAGGGGGGAAAGTTCTTCAACAATGAAACCGATCAGACCGTGTTTCTGGGAAATTATAGCATCTCAACGAGCCAAAACTTGTTCACAACGGTTGGCTGTGAAACACTTGGATTAGTGGTGGGAAGGGATTCAGAGGCAGAGAGAATGAGACCGTTTCCTAAGACATGCTTATCATACTGCGACCGACGTAAAGACGCAAAGGATGGGGAGTGCACCGGAACCGGTTGTTGCAATACTTCTATACCCGATGCCTCACCACAAGGCTTATCGTACATTTATTATTCTTTTGAGAATTCCATTTTGAATAACGGTGAAATATTCGTTGACTTCAACAACCCTTGTGGTTATGCTTTTGTGGTGGAAAAAGGAGAGTACAAGTTTGAGACCACACATCTGAAACAGTTGGAGACTACTACGTTCCCAGTGGTGCTGGATTGGAGTGTAGGGAACCTCAAATGTAAAGAAGCTCGGAAGAAACATTCCACCTATGCGTGTAAGGCGCACAACAGCACGTGTCACGATTCCACCAAGCGTCGTGGTTACCTATGCAAATGTTCTTCTGGCTTTCAGGGTAACGCTTATCTCCCTCATGGTTGTAAAGATGTTGATGAGTGCAAGACACCCAATAAATTTTGCCATGCCAATGCAACATGCAACAACACATATGGGAACTACACTTGTGCTTGTCACAAAGGGTACAATGGAAATGGCAAACTTCAAGGAACTGGATGCACTCCCAACAGATCCTTCTCCAAACTTATCACACACACAATTCCATTGATTGTCAGTTTAAGCATCTTAGTGTTATTTGTGGCGAGCTTTAATGCTTATTGTGGATTGAGAAAAAGGAAGCTCAACAAACTTAAAGAACAGTTTTTTCAACAAAATGGTGGTCTATTGTTACAACAAAAAATTGCCAAACATAGAGGTTCAATTGAAACAGCTAAAATCTTTAGCATAGAAGAGCTAAAGAAGGCCACCAACAACTTTGATGAAGTCAAGATCCTAGGCCGAGGAGGCTACGGAATAGTTTACAAAGGATTATTACAAGACAACAAAACCGTTGCAATCAAAAAGTCCAAAATCAGTGACCAAAGCCAGATTGAACAATTCATCAATGAGGTGGTAATACTTACTCAAATCAACCATACAAATGTGGTTAAACTTTTGGGGTGTTGCTTAGAGACACAAGTTCCATTGCTCGTTTATGAATTCATTCAAGGTGGTACTCTTAATGATCATCTTCATGGTCAGAACCAATCTTTAAAGCTTAACTGGAAAACAAGATTGAGAATAGCAGCAGAAACTGCTGGGGCTTTGGCATACTTGCATTCTGCTACTTGTCCACCAATCATACATAGAGATGTTAAAACTACCAACATACTTCTTGATCATAATCTCAAAGCAAAGGTTTCTGATTTCGGAGCTTCAAAGATTGTTCCCCTTGATAAAACCGAACTATCCACCTTGGTGCAAGGGACTGTGGGGTATCTAGACCCTGAATACTTCCACACAAGCCACTTAACAGAAAAGAGTGATGTGTATAGTTTCGGAGTCGTTCTAGCAGAGTTAGTTACAGGACGAAAAGCACTTTGTTTTGATTTGCCTGAGGATGATAGAAACCTTGCAATGTACTTCATTTCTTCAATGAATAAGGGTCGCTTACTTCAGATTCTGGACAATCAGATAACAAATGAGGCAAAGCCCGAGCAGCTCATGGAATTTGCCAATATTGCAAAACGATGTTTGAGGTTGAAGGGAGAAGAAAGACCTACCATGAAAGAAGTGGCAACTGAACTTGAGGGACTTAGAATAATGGAAAATCATAGGTGGGAAAGTGATAGATCGTCTTTGGAAGAGACTGAAGATTTGCTCAATGCATCACCATCATCATCATCATTGGCTTTTTACAGTGAAGATAATGGATCTTATGGAAGGGACATTATTTCTAGATTGGAAAGCATAGGTCAGATTTCTATTTCATTAGGTGGAAGTGCTAATAAGATCTCCATCGACACAAGCAGAAAGAAGGGAAAACTCCCAAATAATGAAACAGATCAGACGCAACCGTTTGCTAAGACATGCTTATCCTACTGCGAGGAGCGTGAAGATGCAAAGGACCCACAGGGACATGGCTTGTCGCTAATGTCTTACTCTTTTGCAAAAGCCCTCCTGGTTGCAAAGATATTAATGAGTTATGCGTAA 2517 0.4215 MAMEQSSNIRNVKLPLMLLVAVAALHYCAAANCTRSCGSVSIPFPFGTTKECSLAPEFLIYCTNKHVPHLQDNHLRLRSIDVDHGELRVSLPVASDCYFTNSSSKGGKFFNNETDQTVFLGNYSISTSQNLFTTVGCETLGLVVGRDSEAERMRPFPKTCLSYCDRRKDAKDGECTGTGCCNTSIPDASPQGLSYIYYSFENSILNNGEIFVDFNNPCGYAFVVEKGEYKFETTHLKQLETTTFPVVLDWSVGNLKCKEARKKHSTYACKAHNSTCHDSTKRRGYLCKCSSGFQGNAYLPHGCKDVDECKTPNKFCHANATCNNTYGNYTCACHKGYNGNGKLQGTGCTPNRSFSKLITHTIPLIVSLSILVLFVASFNAYCGLRKRKLNKLKEQFFQQNGGLLLQQKIAKHRGSIETAKIFSIEELKKATNNFDEVKILGRGGYGIVYKGLLQDNKTVAIKKSKISDQSQIEQFINEVVILTQINHTNVVKLLGCCLETQVPLLVYEFIQGGTLNDHLHGQNQSLKLNWKTRLRIAAETAGALAYLHSATCPPIIHRDVKTTNILLDHNLKAKVSDFGASKIVPLDKTELSTLVQGTVGYLDPEYFHTSHLTEKSDVYSFGVVLAELVTGRKALCFDLPEDDRNLAMYFISSMNKGRLLQILDNQITNEAKPEQLMEFANIAKRCLRLKGEERPTMKEVATELEGLRIMENHRWESDRSSLEETEDLLNASPSSSSLAFYSEDNGSYGRDIISRLESIGQISISLGGSANKISIDTSRKKGKLPNNETDQTQPFAKTCLSYCEEREDAKDPQGHGLSLMSYSFAKALLVAKILMSYA* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2733 838 Gene3D Phosphorylase Kinase; domain 1 405 509 - -
Ahy17g2733 838 SMART egf_5 256 304 IPR000742 -
Ahy17g2733 838 SMART egf_5 308 349 IPR000742 -
Ahy17g2733 838 ProSiteProfiles Protein kinase domain profile. 434 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2733 838 Pfam Wall-associated receptor kinase galacturonan-binding 33 89 IPR025287 GO:0030247
Ahy17g2733 838 ProSitePatterns Calcium-binding EGF-like domain signature. 305 331 IPR018097 GO:0005509
Ahy17g2733 838 Gene3D Transferase(Phosphotransferase) domain 1 510 730 - -
Ahy17g2733 838 CDD EGF_CA 305 339 - -
Ahy17g2733 838 SMART serkin_6 434 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2733 838 CDD STKc_IRAK 440 707 - -
Ahy17g2733 838 Gene3D Laminin 308 343 - -
Ahy17g2733 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Ahy17g2733 838 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 322 333 IPR000152 -
Ahy17g2733 838 SUPERFAMILY Protein kinase-like (PK-like) 418 709 IPR011009 -
Ahy17g2733 838 Pfam Calcium-binding EGF domain 305 342 IPR001881 GO:0005509
Ahy17g2733 838 SUPERFAMILY EGF/Laminin 305 340 - -
Ahy17g2733 838 ProSitePatterns Protein kinases ATP-binding region signature. 440 463 IPR017441 GO:0005524
Ahy17g2733 838 Gene3D Laminin 256 307 - -
Ahy17g2733 838 ProSiteProfiles EGF-like domain profile. 305 340 IPR000742 -
Ahy17g2733 838 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 735 IPR045274 GO:0007166
Ahy17g2733 838 Pfam Protein tyrosine and serine/threonine kinase 438 704 IPR001245 GO:0004672|GO:0006468
Ahy17g2733 838 SMART egfca_6 305 349 IPR001881 GO:0005509
Ahy17g2733 838 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 16 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2733 Ahy-Chr17 125435164 125441408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2733 32 745 Receptor kinase-like Gene Family AT1G21250 45.342 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy17g2733 PK_Tyr_Ser-Thr 3.50E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2733 - - ahf:112763858 1650.57