Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2696 ATGTCTAACACTGCTGGTCAAATCATCAAGTGCCGAGCTGCGGTTGCATGGGAGGCAGGGAAGCCATTGGTGATTGAAGAAGTGGAGGTTGCGCCACCTAAGGCCGGTGAAGTCCGTTTGAAGATTCTCTACACCTCACTTTGCCACACCGATGTTTACTTCTGGGAAGCCAAGGGCCAGACTCCATTATTTCCTCGGATATTTGGTCATGAAGCTGGAGGGATTGTGGAGAGTGTAGGAGAGGGAGTGACTCATCTGAAACCAGGTGACCATGCCCTCCCTGTGTTCACCGGAGAGTGTGGCGAATGCCCTCACTGCAAGTCAGAGGAGAGCAACATGTGTGACCTTCTCAGGATCAACACTGACAGGGGTGTCATGATCCATGATCAAGAATCAAGATTCTCCATTAAGGGAAAACCAATTTACCACTTTGTTGGGACCTCCACATTCAGTGAATACACTGTGGTTCATGCTGGATGTGTTGCAAAGATCAACCCTGAAGCACCACTTGACAAAGTTTGTGTTCTCAGCTGTGGAATCTGCACAGGTCTTGGTGCCACTATCAATGTTGCAAAACCAAAACCTGGTTCTTCTGTTGCTGTTTTTGGACTCGGAGCTGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCATCAAGAATCATTGGGGTTGATTTAGTTTCCAGCCGATTCGAATTAGCTAAGAAGTTTGGGGTTAATGAATTTGTGAACCCAAAAGATCATAACAAACCTGTACAAGAGGTAATTGCTGAAATGACCAATGGAGGCGTGGATCGTTCTGTTGAATGTACTGGCAGCATCCAAGCTATGATCTCAGCATTTGAATGTGTCCACGATGGTTGGGGTGTTGCTGTTCTTGTTGGTGTGCCAAGCAAAGACGATGCTTTCAAAACTCATCCTACGAACTTCTTGAATGAGAGGACTCTCAAGGGTACCTTCTATGGTAACTACAAACCCCGAACCGATCTTCCTAATGTTGTGGAGAAGTACATGAGAGGGGAGTTGGAACTTGAGAAATTCATCACTCACACTGTTCCGTTCTCAGAGATTAACAAGGCTTTTGATTTGATGCTGAAAGGAGAGTCCATCAGGTGCATCATTCGGATGGACGAATAA 1143 0.4654 MSNTAGQIIKCRAAVAWEAGKPLVIEEVEVAPPKAGEVRLKILYTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMIHDQESRFSIKGKPIYHFVGTSTFSEYTVVHAGCVAKINPEAPLDKVCVLSCGICTGLGATINVAKPKPGSSVAVFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPTNFLNERTLKGTFYGNYKPRTDLPNVVEKYMRGELELEKFITHTVPFSEINKAFDLMLKGESIRCIIRMDE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2696 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Ahy17g2696 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 343 IPR036291 -
Ahy17g2696 380 PANTHER ALCOHOL DEHYDROGENASE 4 378 - -
Ahy17g2696 380 CDD alcohol_DH_plants 9 377 - -
Ahy17g2696 380 PANTHER ALCOHOL DEHYDROGENASE-RELATED 4 378 - -
Ahy17g2696 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Ahy17g2696 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
Ahy17g2696 380 SUPERFAMILY GroES-like 328 377 IPR011032 -
Ahy17g2696 380 Gene3D - 183 321 - -
Ahy17g2696 380 Gene3D - 19 370 - -
Ahy17g2696 380 Pfam Zinc-binding dehydrogenase 206 336 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2696 Ahy-Chr17 124530916 124533603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2696 37 370 Monolignol Biosynthesis Gene Families AT1G72680 25.223 2.76e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2696 K18857 - gmx:100783858 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2696 17 124530916 124533603 Ahy19g3591 19 158518560 158520156 ECH
Ahy12g0192 12 3143916 3146536 Ahy17g2696 17 124530916 124533603 ECH
Ahy13g2772 13 106975836 106977994 Ahy17g2696 17 124530916 124533603 ECH
Ahy17g2696 17 124530916 124533603 Ahy17g2696 17 124530916 124533603 ECH
Ahy17g2696 17 124530916 124533603 Ahy10g1559 10 90907031 90910067 hybridization