Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2678 ATGCTAGCAATTTGTGGAGCTCCTGGCATAGGCAAAACCACATTTGCTGCATATATTTATAATAACATTATTAACAACCAATATATTGCTGCAAGTTTTATATCCAACATCAGAGATAAGCCAAAAGTGGAAGATCTCCAGTCGACGTTGTTATCTGAGATGGGCGAGAAGCGAGAGAGCAGGAGGGGCGATACAGATGGTGGAGGCAGAGAAATCAAACGCAAACTTAGCGTTAAAAAGGTTCTTTTAGTGTTGGATGGTGTTGATAAGATAGAACAGTTGAAATCGCTGGCTGGGGGGTGTGATTGGTTTGGTCCTGGCAGTAAAATTATTATAACAACAAGGGATGCAACTTTGTTGAATAGACATCGTGTTAAAATTAAGAGATATCAAATGACAGAGCTAAGTGATGATGACTCTCACAAACTCTCTTGTTGGTATGCCTTCGATGATAGCGAACCGGCACAAAACTTTGCAAATCTTGTTCCTCAAGCACTAAGTATTGCAAAGGGTGTTCCTTTGGCCTTAAAAAAACTGGGCTCTATATTGAAGGAATGGGAAATGGAATTGGACAGATATAACAAGGTTCCAGAGGCTTTCGAATTTTTGCTCAAATCTTTCGGAAACTGA 630 0.4 MLAICGAPGIGKTTFAAYIYNNIINNQYIAASFISNIRDKPKVEDLQSTLLSEMGEKRESRRGDTDGGGREIKRKLSVKKVLLVLDGVDKIEQLKSLAGGCDWFGPGSKIIITTRDATLLNRHRVKIKRYQMTELSDDDSHKLSCWYAFDDSEPAQNFANLVPQALSIAKGVPLALKKLGSILKEWEMELDRYNKVPEAFEFLLKSFGN* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2678 209 Pfam NB-ARC domain 2 195 IPR002182 GO:0043531
Ahy17g2678 209 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 198 IPR044974 GO:0006952
Ahy17g2678 209 Coils Coil 176 196 - -
Ahy17g2678 209 MobiDBLite consensus disorder prediction 51 70 - -
Ahy17g2678 209 Gene3D - 1 129 IPR027417 -
Ahy17g2678 209 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 198 - -
Ahy17g2678 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 194 IPR027417 -
Ahy17g2678 209 PRINTS Disease resistance protein signature 169 183 - -
Ahy17g2678 209 PRINTS Disease resistance protein signature 75 89 - -
Ahy17g2678 209 PRINTS Disease resistance protein signature 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2678 Ahy-Chr17 124090890 124091519 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2678 2 180 WRKY Transcription Factor Family AT5G45050 32.402 1.10e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2678 - - ahf:114925659 391.349