Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2676 ATGGCATCAAGTAGCAAGTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTGCGGACAACTGGATGGAGGGCAAGGCTGGTGTGTCGAATCCACAGGTACGACAGAACGCATTCCACATAATGCCAGCCGGTAGCGAAATGTTTGTGTTATTCTTTCAGGACACAATGTATGATACGAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAGGGAAGGGGGGCTTCAAATGTTGCCCTTTTTTTGGGTTTGGATGAGTTGCAAGCAGAAGATGTTCTTGAAATGGAGTTTTCTTCACCTCAGGAGGCAAGTGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTCGTTTGTAATAGGCAGGGATTTCGAGAGAAGAAATGGTTGGAGAAGGTTGATCGCAAAAGGGAGCATAAGGTTGTAACCCGATGCGGATGCACGGCGGAGATGAGGATAAAGCGGAAAGAGGGTAGTGGGAGGTGGTATGTGTCGCGTTTTGTCGAGGAACATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGGGAGATTGGGATTAGCATACCTAAGATTTATGAGTCATTCGCAGCACAACTAGGGGGCTTTAATCTGGTAACATTCACAAAACAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGTAACTGCAGCTATTAGTTACTTGGAAGGTCTGGCACGCATCGATGGGAAAATATTTTGGCGGTACAAGTTGGGGTCAGGGCAACAGCTATGCAACTTGTTTTGGAGCGATGGTCATTGTCAGGAAGATTATGGGATATTTGGCGATGTGCTAGCATTCGACGCTACTTACGGCCGCAACAAGTACAACCTACCCGTTGTAGTCTTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTCTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCATTCCGTCATCACGGATGGCGACCCGGCCATGCGGATAGCAATCCAGTCCGTCTTTCCAGACGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACGCGACTGCTAACATAAGTGACCCGAGATTCACACAAATGTTTAGACACTGCATGCTGGCAGATATTGAAATCGAGGAGTTCGAAGCGCATTGGGAATCAATGGTCAATGAGTGCGGTGTTAGGGAGGTTGAGTGTGAGTCACTACATGCCAAACTAGGGAGGTTTGTTGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGACTTTCTTCGTGACACCGAGGACGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACGGAGTTTGTTGAGCTGGAAAAGTCTGGATGGAGTATGTTCACCCGCGAAATGTTTCTCAGATTCCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATACGCGAATTTAATGACAGTGAGAACCCTCATGCATATACTCTCCAGAAGTATCGGAGGCCTGAGATGAATTGGAAGGTATATAGGGACCATATCTCGAACACATTTAGTTGCACCTGCATGCGTATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTGTGTGTAAGTCTAGACTTGGTGGAAATCCCTGAAAGCCTTGTCCTCCGTAGATGGTCTAAGGCAGCCAAATTGGAGATCCATAACCAATGTGTTGAGCAACATACTGCTGACCCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGTAAGCGCTTAGGGCGCGTTGCTTGCATGAGTCATGAAGACTTCAAACTTTACTCAAAGAAGCTTTTGAGCGATGCTGTGTTCCTTGAAATAAAGTACGGGTTAAGACCATCAACGGATGATATCACAACAGCAAATGATTGCGGGGTGAAGGACCCTATTCGTGTCAGAACAAAAGGCACGGGTCGGATGAGCCAAGCAGGCGGTTCTGCGTCGAAAACGAAAAGAAAGTGCAGCACATGCGGGAAGCTAGGGCACCGGAGGACTAGATGCCCCAACGGAGCCACGCAAGCGCCAACGAGGAACAATGAATCACATGGTGGAAGAAATAAACGCAAGCGATCTAAGGTACCCGTCGTTGTCCCAGATAATTGTCACGCTGAAAATGCATGTCAAGCTGGAAGCGACAAACGGGATCACTTTTCGCTTGCAGACCCATGA 2379 0.4792 MASSSKFCKDACMWNEPLADNWMEGKAGVSNPQVRQNAFHIMPAGSEMFVLFFQDTMYDTRVEEDAELSDWEGRGASNVALFLGLDELQAEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKVVTRCGCTAEMRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVTAAISYLEGLARIDGKIFWRYKLGSGQQLCNLFWSDGHCQEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPHSVITDGDPAMRIAIQSVFPDAHHRLCAWHLLRNATANISDPRFTQMFRHCMLADIEIEEFEAHWESMVNECGVREVECESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKSGWSMFTREMFLRFRDSLKRCVRVRIREFNDSENPHAYTLQKYRRPEMNWKVYRDHISNTFSCTCMRMESFGIPCVHILSVCVSLDLVEIPESLVLRRWSKAAKLEIHNQCVEQHTADPSVTYRTRLGAFSQLCKRLGRVACMSHEDFKLYSKKLLSDAVFLEIKYGLRPSTDDITTANDCGVKDPIRVRTKGTGRMSQAGGSASKTKRKCSTCGKLGHRRTRCPNGATQAPTRNNESHGGRNKRKRSKVPVVVPDNCHAENACQAGSDKRDHFSLADP* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2676 792 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 455 639 IPR031052 GO:0006355
Ahy17g2676 792 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 91 444 IPR031052 GO:0006355
Ahy17g2676 792 MobiDBLite consensus disorder prediction 706 767 - -
Ahy17g2676 792 ProSiteProfiles Zinc finger SWIM-type profile. 566 599 IPR007527 GO:0008270
Ahy17g2676 792 PANTHER OS02G0262500 PROTEIN 455 639 - -
Ahy17g2676 792 SUPERFAMILY Retrovirus zinc finger-like domains 703 743 IPR036875 GO:0003676|GO:0008270
Ahy17g2676 792 Pfam FAR1 DNA-binding domain 107 196 IPR004330 -
Ahy17g2676 792 SMART 26again6 574 601 IPR006564 GO:0008270
Ahy17g2676 792 Pfam MULE transposase domain 316 410 IPR018289 -
Ahy17g2676 792 MobiDBLite consensus disorder prediction 709 723 - -
Ahy17g2676 792 ProSiteProfiles Zinc finger CCHC-type profile. 722 739 IPR001878 GO:0003676|GO:0008270
Ahy17g2676 792 PANTHER OS02G0262500 PROTEIN 91 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2676 Ahy-Chr17 123933107 123936704 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g2676 MULE 6.00E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2676 - - aip:107611673 1462.59