Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2652 ATGAACAGCTACTGCTACGACAACAACGACGTCGTTATGGAACAAAGCAATAGCATCCTATGCAAATACACAGTGCACCGCACTGTCACTAACAAATTCACCAAACACAACAAGAAATCCACCATGGAACCCAGAACGGTGCGTGTGTCTTACACCGATCCAGACGCCACTGACTCCTCCGCCGATGAAGCAGAACAACACTTCCTCTCTTCTTCTCGCAAGAGAGTAAAGCGTTACATCAACAGCATTCAAATCGAACCCGCTTCCACCAAGAACCCTGTCTCCGCCGCACACAATAAGAAAAGGGCTACTGCAAACGCTGGCGACGCTGCTGCTTCTTGCCGCCGGCCGGCCAAGGCTCCGGTGACCACCAACGGAGGGAAGAAGTTCCGCGGTGTAAGGCAAAGACCATGGGGGAAGTGGGCGGCGGAGATTAGAGATCCGGCGAGAAGAGTTCGTCTCTGGCTGGGAACCTACGACACGGCGGAAGAAGCTGCCATGGTTTATGACAATGCGGCCATTCAAATTCGTGGCCCTGACGCTCTCACAAACTTCATCACTCCACCGCAGCGCGGAGAACCACAGCCACAGCCACAACCACAAGAAGGAGAAACAACCACCGCCGTGAAACCAGAAATGAAGGTGGTTGTAACTGCAGAAGCTTCCGGCTCCGGCTCCGGCTACGACTCCGGTTCAGAAGATCACCGGTGTCTGAACCTCTCATCCCCAACCTCAGTTCTCCAATTCAGAAGCAGCGAAACGGAATCGTCAGAGCAAGCAAAGAAACAGTCGTTCGTCCATTGTAGTAGTGATGACGTGTCAGGTTCAGGTTCAGTTTCAATGGAAGAAGTATTCGGAGAGTGCCAAGGCGAAACGAGCTTGTTCGAGGAGACTGGTGAGTTCTTGGGTTTGGAAATGATGCCGGTTTGGGATGAGGTGTTCGATTTTCAAACGCCGCAGTACCCAGTGATGTTCGAGGAGGAAGAAGAGAAACGGTTATTTGGGGAAACAAAGACGACGTCGTTTTGGTGCGCAGAAGAGGATCAAGAAGTAAGCATGGAGAACTATAACAGTAGCATTGTGCTGGCTGATTCACTCATCGATTTCGAGAAGGCTTGTAATCCAACTCCAACTCCAACTCCATCTAGCTTTTGCCAAATGGACGATGATTACTTCCAAGATATTTTGTTGGCTTCTGATCCTCTCGTCCTTCTATAA 1218 0.5066 MNSYCYDNNDVVMEQSNSILCKYTVHRTVTNKFTKHNKKSTMEPRTVRVSYTDPDATDSSADEAEQHFLSSSRKRVKRYINSIQIEPASTKNPVSAAHNKKRATANAGDAAASCRRPAKAPVTTNGGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIQIRGPDALTNFITPPQRGEPQPQPQPQEGETTTAVKPEMKVVVTAEASGSGSGYDSGSEDHRCLNLSSPTSVLQFRSSETESSEQAKKQSFVHCSSDDVSGSGSVSMEEVFGECQGETSLFEETGEFLGLEMMPVWDEVFDFQTPQYPVMFEEEEEKRLFGETKTTSFWCAEEDQEVSMENYNSSIVLADSLIDFEKACNPTPTPTPSSFCQMDDDYFQDILLASDPLVLL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2652 405 Gene3D AP2/ERF domain 128 187 IPR036955 GO:0003700|GO:0006355
Ahy17g2652 405 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Ahy17g2652 405 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Ahy17g2652 405 MobiDBLite consensus disorder prediction 186 210 - -
Ahy17g2652 405 SMART rav1_2 129 192 IPR001471 GO:0003700|GO:0006355
Ahy17g2652 405 MobiDBLite consensus disorder prediction 248 268 - -
Ahy17g2652 405 CDD AP2 128 185 IPR001471 GO:0003700|GO:0006355
Ahy17g2652 405 ProSiteProfiles AP2/ERF domain profile. 129 186 IPR001471 GO:0003700|GO:0006355
Ahy17g2652 405 SUPERFAMILY DNA-binding domain 129 185 IPR016177 GO:0003677
Ahy17g2652 405 Pfam AP2 domain 129 178 IPR001471 GO:0003700|GO:0006355
Ahy17g2652 405 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 19 398 - -
Ahy17g2652 405 MobiDBLite consensus disorder prediction 105 131 - -
Ahy17g2652 405 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE 19 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2652 Ahy-Chr17 123633620 123635894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2652 21 297 AP2-EREBP Transcription Factor Family AT4G27950 43.137 1.40e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy17g2652 AP2 1.60E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2652 - - adu:107460630 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2652 17 123633620 123635894 Ahy8g0419 8 8637684 8639928 hybridization