Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2646 ATGGAGAAGATGATGATGATGGGATTGGGAGAAACGAAGAAGTTGAGAGAGGAGCTAGTACAAGGTTTGGAACTGGCGAGACAGCTCCAAATCCATCTTCACGTGGCTTCCACTCCCCATGAAACCCGTGACTTGTTGATCCAAAACATTATCTCTGCTTTTGAAAACGCCCTCCACATCCTCAGATGGACACCGCCACCCGCCGCCGTGGACCCCTCAATCTCACCTGCAATCAGAATGTCCCAAGAGTCTCCACCTTTGAGCACCGGCAGCCCCCGCAGCGAAGACTCCGATAGAGATTTAAGGGATCACGATCCCAATGCTTCCAAAAAAAGGAAGAGTTTGCCAAGATGGACAAAACAGATTCGAGTTGGTCCGGGAATGGGAGTGGAAGGGCCTCTTGACGATGGATACAGTTGGAGAAAATACGGCCAGAAAGACATTCTTGGAGCCACCTATCCAAGAGGGTACTATAGGTGCACACACAGAAATGTTCAAGGATGCTTGGCAACAAAGCAAGTGCAAAGATCCGATGAAGACCCCAACATGTTCGAAATCACATACCGAGGATCACACACATGCACCATGGCTTCATCATCATCCAACAGTGCTTCACTTCCTGCACCCACAACTAGTCCAAGGAACCCAAATAATAATGTTCTGCAAAGCCTTGACCAACAACCACCTATGATGAATGAATTACTCTTGAACCTCAGGGCAGGGTTGAGGGTCCAAACAGAGAATCTGGATAACTGTTCTTCCTTCAACTTCCCTAGTAATTCAAACCATGTTTTCTCATCACAAACACCACCACCACAACCTCAACCTATGCTTGGTGATAATAATTTTCCTTCCTATATGTCCCCTGCTACTTCTGGGATAAGCCAATTCTCAATGTCTTCTGGGAATCAGATCAATGATATGATCTCTGCTTCAAATTCAAACTCACCAACCGTTGGATTAGACTTTTCCTTTGACCAATTTGATTTGGACGGTCATAACAACTTCACATTCGGTAACCCACAATTTTTTCCTTAG 1038 0.4586 MEKMMMMGLGETKKLREELVQGLELARQLQIHLHVASTPHETRDLLIQNIISAFENALHILRWTPPPAAVDPSISPAIRMSQESPPLSTGSPRSEDSDRDLRDHDPNASKKRKSLPRWTKQIRVGPGMGVEGPLDDGYSWRKYGQKDILGATYPRGYYRCTHRNVQGCLATKQVQRSDEDPNMFEITYRGSHTCTMASSSSNSASLPAPTTSPRNPNNNVLQSLDQQPPMMNELLLNLRAGLRVQTENLDNCSSFNFPSNSNHVFSSQTPPPQPQPMLGDNNFPSYMSPATSGISQFSMSSGNQINDMISASNSNSPTVGLDFSFDQFDLDGHNNFTFGNPQFFP* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2646 345 MobiDBLite consensus disorder prediction 93 112 - -
Ahy17g2646 345 Gene3D WRKY domain 120 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g2646 345 MobiDBLite consensus disorder prediction 262 285 - -
Ahy17g2646 345 Pfam WRKY DNA -binding domain 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g2646 345 MobiDBLite consensus disorder prediction 72 126 - -
Ahy17g2646 345 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 342 IPR044810 GO:0003700
Ahy17g2646 345 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 5 342 - -
Ahy17g2646 345 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g2646 345 MobiDBLite consensus disorder prediction 77 92 - -
Ahy17g2646 345 SUPERFAMILY WRKY DNA-binding domain 133 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g2646 345 MobiDBLite consensus disorder prediction 195 220 - -
Ahy17g2646 345 ProSiteProfiles WRKY domain profile. 129 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2646 Ahy-Chr17 123364369 123366056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2646 1 258 WRKY Transcription Factor Family AT4G23810 39.510 1.44e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy17g2646 WRKY 2.10E-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2646 - - gmx:100812027 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0311 12 4442333 4445531 Ahy17g2646 17 123364369 123366056 ECH
Ahy17g2646 17 123364369 123366056 Ahy17g2646 17 123364369 123366056 ECH
Ahy17g2646 17 123364369 123366056 Ahy8g0413 8 8447368 8449122 hybridization