Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2628 ATGTCATCCCTGCTGCTGGTGATGTTGCTGCTGCTATGCTGTATAAGCATGAGAACAAGCGATGCAAAAAACTGTTCATCAATATGGTGCGGGAAACATAACATAAAGCACCCTTTCAGGCTTCAAAACAGTTCAGTTCACTGTGGTGACCACAGGTACACCCTCTCTTGCGAGGATCATCACCAACTTTTCCTGTATTGGAAATCAGCCAAGTTCAGTGTTCAATCAATTAACTACAACAACTACACTATCCGATTAGTGGATGCAAATTTTGCCTTACTACATATGCATCATCATCACTACTACTCTAACTCTTCCCCACTCCTTAATTATTCCTTAGCTTCCTACAATTTCAGTGATTATGAAACTGATGAGCCGTATCAGTATTTGTTATACAAAGTGAATGGAGATAGGCTTATGGTCATGAAGCAGATGATATATGTGAGGTGCATCAACGACACTTTCTATGTGAATTTTGATGGCAAGTCTCTGTGGGAATTGGGGCTGAGAGACTCCTGTTATGTAGAGTGGATGTATCCAACATCTTGGCCTCACGATGAAGAATGCAAAATCAACAACATTTCATGTAGAGACAACCGCAACATGCTTCTCTATGGTTTTGAACTTTCTTGGGCAGTTAGTTCTTGCAACCGTTACTTTCGGGACCAAGTCGAGATCGATGATCATAACAACGTTTTGTGTTATCCTGTTTTTATGCCACTATTTGCAGGTACTCTAATTGGAGGAATAACTTTGTATGTTCTTCTCAAATTTTTACTAGTTGGAGTTCCATTCATCATTCTTTTATGCATATATAAATGGCGACGGAGGCATTTATCTGTGTATTCGACTATTGAAGATTTTCTTCGAAGCGACAATAGTATTATGCCAATTAGATACTCCTACAAGGATATCAAGAACATAACTGGAGTGTTCAAGACAAAACTTGGGAATGGAGGCTACGGTTCTGTCTTCCAAGGAAAACTTCGAAGTGGTCGCCTTGTAGCCGTCAAGTTGTTGAATAAGGCTAAATCCAATGGCCAAGAATTTATCAATGAAGTTGCTACTATTGGTAGAATTCACCATGTCAACATAGTGCAACTTATTGGTTTCTGCATAGAGGGATCAAAGCGTGCTCTCATATATGAGCTGATGGAAAATGGATCATTAGAAAAATACATATTTTTCCCTAAGAATGATTCCTTAAGTTGTGAAAAGCTCTACACCATTTCCCTTAGAATAGCACGTGGTATTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGATATCAAGCCTCACAACATTCTTTTGGATGATAACTTCAACCCAAAAGTCTCTGACTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCACTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATATAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCCAGCCAGATATATTTTCCCTTTTGGGTTTACGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGATTCAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCATTGTGGTGTATACAAACAAGGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTTGAACAAGACGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGACGCACCCACAGAAGAGAATGTTGAACATACTACAACTCATAACAGTTCAAAGTTATCCTCTGATGACATCTCTTCAGTCAGTGATTCAAAGGAATAA 1887 0.3932 MSSLLLVMLLLLCCISMRTSDAKNCSSIWCGKHNIKHPFRLQNSSVHCGDHRYTLSCEDHHQLFLYWKSAKFSVQSINYNNYTIRLVDANFALLHMHHHHYYSNSSPLLNYSLASYNFSDYETDEPYQYLLYKVNGDRLMVMKQMIYVRCINDTFYVNFDGKSLWELGLRDSCYVEWMYPTSWPHDEECKINNISCRDNRNMLLYGFELSWAVSSCNRYFRDQVEIDDHNNVLCYPVFMPLFAGTLIGGITLYVLLKFLLVGVPFIILLCIYKWRRRHLSVYSTIEDFLRSDNSIMPIRYSYKDIKNITGVFKTKLGNGGYGSVFQGKLRSGRLVAVKLLNKAKSNGQEFINEVATIGRIHHVNIVQLIGFCIEGSKRALIYELMENGSLEKYIFFPKNDSLSCEKLYTISLRIARGIEYLHNGCDMKILHFDIKPHNILLDDNFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWVYDELQDGREITIENDSDEEMKLAKRMMIVALWCIQTRPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDAPTEENVEHTTTHNSSKLSSDDISSVSDSKE* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2628 628 PANTHER RUST RESISTANCE KINASE LR10-RELATED 247 605 IPR045874 GO:0004672
Ahy17g2628 628 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 217 IPR045874 GO:0004672
Ahy17g2628 628 MobiDBLite consensus disorder prediction 586 628 - -
Ahy17g2628 628 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 5 217 - -
Ahy17g2628 628 Pfam Wall-associated receptor kinase galacturonan-binding 25 88 IPR025287 GO:0030247
Ahy17g2628 628 Gene3D Transferase(Phosphotransferase) domain 1 385 591 - -
Ahy17g2628 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Ahy17g2628 628 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Ahy17g2628 628 Gene3D Phosphorylase Kinase; domain 1 289 384 - -
Ahy17g2628 628 Pfam Protein kinase domain 313 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2628 628 SUPERFAMILY Protein kinase-like (PK-like) 292 580 IPR011009 -
Ahy17g2628 628 ProSiteProfiles Protein kinase domain profile. 310 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2628 628 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 247 605 - -
Ahy17g2628 628 SMART serkin_6 310 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2628 Ahy-Chr17 122908783 122912137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2628 3 591 Receptor kinase-like Gene Family AT5G38260 36.542 1.88e-107 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy17g2628 Pkinase 9.50E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2628 - - ahf:112704953 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2628 17 122908783 122912137 Ahy17g2628 17 122908783 122912137 ECH