Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2627 ATGGCTGGAATCTTTTTATTTGTTCTTGCCAAATTTGCACTTGGAGCTCCATGCATCATTATCTTCTGCATATATAAATGGAGACGAAGGCATTTATCCATATATGATAATATCGAAGATTTTCTGCAAAGTGACAATAACATTATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGAAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTAGCAGCTGTTAAGGTATTGAATGAGGCCAAATCCAATGGCCAAGAATTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTTGTTTGGTATATGAGTTAATGCAGAATGGCTCTTTAGAAAAATACATATTTTCACCTCAAGACAGTGCTTCCTTAAGTTGTGAAAAACTCTATACCATTTCCCTTGGAGTGGCACGTGGTATTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAACATTCTTTTGAATGAAAACTTCAATCCAAAAGTCTCTGACTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGCAGCAAGAGGAACCATAGGGTATATGGCTCCTGAGCTCTTCTACAGAAATGTTGGCGCAATCTCGTACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACTGAATGAAAATTCCAGCCAGATATATTTTCCCTTTTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCTAAAAGAATGATGATTGTGGCATTGTGGTGTATACAGACAAAGCCTAATGATCGACCTTCAATGAAGAAAGTTGTGGAGATACTTGAACAAGACGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTAATGCACCCAGAGAAGAGAATGTTGAACATACCACAACTCATAGCAGTTCATCACTTTCCTCTGACATGTCGTCAGTTAGTGATTCAAAGGAATAG 1146 0.3874 MAGIFLFVLAKFALGAPCIIIFCIYKWRRRHLSIYDNIEDFLQSDNNIMPIRYSYKEIKNITEKFKTKLGNGGYGSVFQGKLRSGRLAAVKVLNEAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPQDSASLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLNENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNALNENSSQIYFPFWVYDELQDGREITIENDTDEEMKLAKRMMIVALWCIQTKPNDRPSMKKVVEILEQDDDLEMPPKPYFYPLNAPREENVEHTTTHSSSSLSSDMSSVSDSKE* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2627 381 Gene3D Transferase(Phosphotransferase) domain 1 138 345 - -
Ahy17g2627 381 MobiDBLite consensus disorder prediction 362 381 - -
Ahy17g2627 381 Gene3D Phosphorylase Kinase; domain 1 39 137 - -
Ahy17g2627 381 ProSiteProfiles Protein kinase domain profile. 63 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2627 381 Pfam Protein kinase domain 66 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2627 381 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 4 350 - -
Ahy17g2627 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Ahy17g2627 381 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
Ahy17g2627 381 SUPERFAMILY Protein kinase-like (PK-like) 43 334 IPR011009 -
Ahy17g2627 381 SMART serkin_6 63 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2627 381 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 350 IPR045874 GO:0004672
Ahy17g2627 381 MobiDBLite consensus disorder prediction 343 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2627 Ahy-Chr17 122906320 122907713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2627 10 378 Receptor kinase-like Gene Family AT1G66910 42.708 9.40e-105 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy17g2627 Pkinase 4.10E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2627 - - aip:107605930 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2627 17 122906320 122907713 Ahy17g2627 17 122906320 122907713 ECH