Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2624 ATGACCAAAGAAATGTCATCCGTTGTTGTGTTGTTGTTATCGTGCCTGTGCTTGTTCATCACCACCGCCACCACCGCCGGCGCAGCACATAATAAGTGTCTATCTCAATGGTGCGGGAAGCATAACATAAGCGATCCTTTCAGGCTAGAAGACAGTCCAAGCCAATGTGGTGACCACAGGTACACCCTCTCTTGCGAGGAGGATCACCAGTTGGTCCTGTATTGGAGATCAAGAAAGTTCAATGTTCAGTCAATTAATTACAACAACTACACGATCCGGCTCCTGGATGCCAATATTAGCCACGATTACACTTCTCGCCCTCCTTATTATTCCTTACCTTACGATTATCATAGATATGAACTGTATCCCTTAAGCTACGATTATCATGAATTGACGACTCTCGTGGTGGTATATTTGAGGTGTCCAAATGACGTCATCGCAACTGCTACTGCTACTTGTATGACGAATGATTCCGATGCACTTGGGACTGCTTTCTACCTCGTCAGTGTTTTTCACAAACGCCTCTGGGATTTCGCGGTTGCAGACTCGTGCCGCATAGAGTGGATGTATCCCTCATCGTGGCCTGCTGAACGTGAAAGCAACTCATGCACTGGCGTCCGTACTCTGCTGCTTTATGGCTTTGAACTTTCTTGGTTTCCAGCACTCTACAAATCGAGTATAATAGAATCGATTGGACTTCTTCTGCGCTCTGCAGCAACTGTTGCAGCTCTGTATGTTCTTGCCAAATCTGTACTATTTGGAGTTCCATTCCTCATTCTTTTATGCATATATAAATGGCGACGGAGGCATTTATCTGTGTATCCGACTATTGAAGATTTTCTTCAAAGCGACAATAGTATTATGCCAATTAGATATTCCTACAGGGATATCAAGAACATAACAGGAGTGTTCAAAACAAAACTGGGGAATGGAGGCTACGGTTCTGTCTTTCAAGGAAAACTTCGAAGTAGCCGCCTTGTAGCCGTCAAGTTGTTGAATAAGGCTAAATCCAATGGCCAAGAATTCATCAATGAAGTTGCTACTATTGGTAGAATTCACCATGTCAACATAGTGCAACTTATTGGTTTCTGCGTAGAGGGATCAAAGCGTGCTCTCATATATGAGCTCATGGAAAATGGATCATTAGAAAAATACATATTTTCCCCTCAGAAGAATGATTCCTTAAGTTGTGAAAAGCTCTACACCATTTCCCTTGGAGTAGCACGTGGAATTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAATATTCTTTTGGATGAGAACTTCAACCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCCAGCCAAATATATTTTCCCTTCTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCATTGTGGTGTATACAAACAAGGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGATGATGACTTAGAAATGCCTCCAAAACCGTACTTCTACCCACTTGATGCACTCACAGAAGAGAATGTTGAAGATACTACAACTCATAACAGTTCAAAGTTATCCTTTGGTGACATCTCTTCAGTTAGTGATTCAAAGGAATAG 1866 0.4202 MTKEMSSVVVLLLSCLCLFITTATTAGAAHNKCLSQWCGKHNISDPFRLEDSPSQCGDHRYTLSCEEDHQLVLYWRSRKFNVQSINYNNYTIRLLDANISHDYTSRPPYYSLPYDYHRYELYPLSYDYHELTTLVVVYLRCPNDVIATATATCMTNDSDALGTAFYLVSVFHKRLWDFAVADSCRIEWMYPSSWPAERESNSCTGVRTLLLYGFELSWFPALYKSSIIESIGLLLRSAATVAALYVLAKSVLFGVPFLILLCIYKWRRRHLSVYPTIEDFLQSDNSIMPIRYSYRDIKNITGVFKTKLGNGGYGSVFQGKLRSSRLVAVKLLNKAKSNGQEFINEVATIGRIHHVNIVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQKNDSLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWVYDELQDGREITIENDTDEEMKLAKRMMIVALWCIQTRPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDALTEENVEDTTTHNSSKLSFGDISSVSDSKE* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2624 621 PANTHER RUST RESISTANCE KINASE LR10-RELATED 242 600 IPR045874 GO:0004672
Ahy17g2624 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Ahy17g2624 621 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Ahy17g2624 621 Pfam Protein kinase domain 305 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2624 621 ProSiteProfiles Protein kinase domain profile. 302 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2624 621 SMART serkin_6 302 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2624 621 MobiDBLite consensus disorder prediction 602 621 - -
Ahy17g2624 621 Gene3D Transferase(Phosphotransferase) domain 1 377 584 - -
Ahy17g2624 621 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Ahy17g2624 621 Gene3D Phosphorylase Kinase; domain 1 280 376 - -
Ahy17g2624 621 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Ahy17g2624 621 SUPERFAMILY Protein kinase-like (PK-like) 283 573 IPR011009 -
Ahy17g2624 621 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 242 600 - -
Ahy17g2624 621 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 224 IPR045874 GO:0004672
Ahy17g2624 621 MobiDBLite consensus disorder prediction 596 621 - -
Ahy17g2624 621 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 13 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2624 Ahy-Chr17 122791283 122793703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2624 38 596 Receptor kinase-like Gene Family AT5G38260 36.213 1.16e-105 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy17g2624 Pkinase 1.20E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2624 - - aip:107607706 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2624 17 122791283 122793703 Ahy17g2624 17 122791283 122793703 ECH